RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 GRASPQ7Z6J2 395 aaPredicted RBP23.57■■□□□ 1.36
COL9A3-211ENST00000477612 BRSK2Q8IWQ3 736 aa23.57■■□□□ 1.36
COL9A3-211ENST00000477612 EFCAB13Q8IY85 973 aa23.57■■□□□ 1.36
COL9A3-211ENST00000477612 ZNF507Q8TCN5 953 aa23.57■■□□□ 1.36
COL9A3-211ENST00000477612 NXPE3Q969Y0 559 aa23.57■■□□□ 1.36
COL9A3-211ENST00000477612 KMT2EQ8IZD2 1858 aa23.57■■□□□ 1.36
COL9A3-211ENST00000477612 CCL16O15467 120 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 LAMP2P13473 410 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 GBP2P32456 591 aaPredicted RBP23.56■■□□□ 1.36
COL9A3-211ENST00000477612 ASIC1P78348 528 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 GLIS3Q8NEA6 775 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 ZSWIM2Q8NEG5 633 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 LEO1Q8WVC0 666 aaPredicted RBP23.56■■□□□ 1.36
COL9A3-211ENST00000477612 PBXIP1Q96AQ6 731 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 CBWD1Q9BRT8 395 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 KCNH6Q9H252 994 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 AFF4Q9UHB7 1163 aaKnown RBP23.56■■□□□ 1.36
COL9A3-211ENST00000477612 KCNH3Q9ULD8 1083 aa23.56■■□□□ 1.36
COL9A3-211ENST00000477612 PVALEFA0A1B0GWK0 134 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 SPTLC1O15269 473 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 EXTL3O43909 919 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 FSHRP23945 695 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 CMA1P23946 247 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 ELF1P32519 619 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 HOXD13P35453 343 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 KRT85P78386 507 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 TDGQ13569 410 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 DSTYKQ6XUX3 929 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 HPS3Q969F9 1004 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 FAM213AQ9BRX8 229 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 AVENQ9NQS1 362 aaPredicted RBP23.55■■□□□ 1.36
COL9A3-211ENST00000477612 DPP3Q9NY33 737 aa23.55■■□□□ 1.36
COL9A3-211ENST00000477612 DNMT3BQ9UBC3 853 aaKnown RBP23.55■■□□□ 1.36
COL9A3-211ENST00000477612 SEC24AO95486 1093 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 CYP11A1P05108 521 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 SLFN14P0C7P3 912 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 WNT7BP56706 349 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 FAM26FQ5R3K3 315 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 FBXL6Q8N531 539 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 SAAL1Q96ER3 474 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 BORCS6Q96GS4 357 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 SENP8Q96LD8 212 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 HPSEQ9Y251 543 aa23.54■■□□□ 1.36
COL9A3-211ENST00000477612 TIMM13Q9Y5L4 95 aaPredicted RBP23.54■■□□□ 1.36
COL9A3-211ENST00000477612 OR6C75A6NL08 312 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 ANHXE9PGG2 379 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 NTHL1P78549 312 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 ARMCX5Q6P1M9 558 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 GET4Q7L5D6 327 aaPredicted RBP23.53■■□□□ 1.36
COL9A3-211ENST00000477612 USP37Q86T82 979 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 GPD1LQ8N335 351 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 SPATA32Q96LK8 384 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 SMOC2Q9H3U7 446 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 DUSP12Q9UNI6 340 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 ATP6V1DQ9Y5K8 247 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 UBE4BO95155 1302 aa23.53■■□□□ 1.36
COL9A3-211ENST00000477612 ZDBF2Q9HCK1 2354 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 FAM237AA0A1B0GTK4 181 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 ACTN4O43707 911 aaKnown RBP23.52■■□□□ 1.36
COL9A3-211ENST00000477612 ODC1P11926 461 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 TAF6P49848 677 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 ARPP19P56211 112 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 SNRPFP62306 86 aaKnown RBP23.52■■□□□ 1.36
COL9A3-211ENST00000477612 GPR17Q13304 367 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 CUL4BQ13620 913 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 MYBPC2Q14324 1141 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 BLZF1Q9H2G9 400 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 PCIF1Q9H4Z3 704 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 CYP4F11Q9HBI6 524 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 HCFC1R1Q9NWW0 138 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 RBAKQ9NYW8 714 aaPredicted RBP23.52■■□□□ 1.36
COL9A3-211ENST00000477612 USP25Q9UHP3 1055 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 SERTAD1Q9UHV2 236 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 CDH7Q9ULB5 785 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 POLIQ9UNA4 740 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 INSL5Q9Y5Q6 135 aa23.52■■□□□ 1.36
COL9A3-211ENST00000477612 PRRG1O14668 218 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 TGFB1I1O43294 461 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 LRG1P02750 347 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 PTPN2P17706 415 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 CASP1P29466 404 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 ADCY1Q08828 1119 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 BMT2Q1RMZ1 405 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 OVOS1Q6IE37 1185 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 RNF19BQ6ZMZ0 732 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 CEP57L1Q8IYX8 460 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 SLC44A3Q8N4M1 653 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 CACTINQ8WUQ7 758 aaKnown RBP23.51■■□□□ 1.35
COL9A3-211ENST00000477612 SCFD1Q8WVM8 642 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 FGF13Q92913 245 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 DSEQ9UL01 958 aa23.51■■□□□ 1.35
COL9A3-211ENST00000477612 WDFY4Q6ZS81 3184 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 GOLGA8IPA6NC78 632 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 GOLGA8JA6NMD2 632 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 KLRC4O43908 158 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 VNN2O95498 520 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 CPB1P15086 417 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 PFKFB1P16118 471 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 AFMP43652 599 aa23.5■■□□□ 1.35
COL9A3-211ENST00000477612 PABPC1LQ4VXU2 614 aaKnown RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms