RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 WDR78Q5VTH9 848 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 GPRC5AQ8NFJ5 357 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 FMO2Q99518 471 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 HERPUD2Q9BSE4 406 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 IMPG2Q9BZV3 1241 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 CDT1Q9H211 546 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 EPB41L4BQ9H329 900 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 ADAM22Q9P0K1 906 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 RASAL2Q9UJF2 1139 aa12.25□□□□□ -0.45
NUP188-205ENST00000477069 GLTPD2A6NH11 291 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 PODXLO00592 558 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 MMP8P22894 467 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 SSTR3P32745 418 aaPredicted RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 RPL21P46778 160 aaKnown RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 LAMC2Q13753 1193 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 MMS22LQ6ZRQ5 1243 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 PHLDB2Q86SQ0 1253 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 SH2D3CQ8N5H7 860 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 CEP120Q8N960 986 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 ATP6V1G3Q96LB4 118 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 NLRP4Q96MN2 994 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 TRIM31Q9BZY9 425 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 VTA1Q9NP79 307 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 MTUS1Q9ULD2 1270 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 RALGAPA2Q2PPJ7 1873 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 MYO1FO00160 1098 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 CDH5P33151 784 aaPredicted RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 MAN1A1P33908 653 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 ZNF568Q3ZCX4 644 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 GJC2Q5T442 439 aaPredicted RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 LIN9Q5TKA1 542 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 KDM7AQ6ZMT4 941 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 PPTC7Q8NI37 304 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 MRPL47Q9HD33 250 aaKnown RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 CISHQ9NSE2 258 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 HMGB1P1B2RPK0 211 aaPredicted RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 O00370 1275 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 PSTPIP1O43586 416 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 LSM8O95777 96 aaKnown RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 ADORA2AP29274 412 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 DHX9Q08211 1270 aaKnown RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 KLF1Q13351 362 aaPredicted RBP12.24□□□□□ -0.45
NUP188-205ENST00000477069 CEP85LQ5SZL2 805 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 LEKR1Q6ZMV7 388 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 TMEM192Q8IY95 271 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 OR2W6PQ8NHA6 318 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 CXorf38Q8TB03 319 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 MORF4L1Q9UBU8 362 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 SNX24Q9Y343 169 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 SCINQ9Y6U3 715 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 COL1A2P08123 1366 aa12.24□□□□□ -0.45
NUP188-205ENST00000477069 INO80B-WBP1J3KQ70 363 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 PDHXO00330 501 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 INSRRP14616 1297 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 GBP1P32455 592 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 TAS2R40P59535 323 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 DAB2IPQ5VWQ8 1189 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 KCTD16Q68DU8 428 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 THNSL1Q8IYQ7 743 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 WDTC1Q8N5D0 677 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 FBXO25Q8TCJ0 367 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 SLC10A4Q96EP9 437 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 INO80BQ9C086 356 aaPredicted RBP12.23□□□□□ -0.45
NUP188-205ENST00000477069 PRMT7Q9NVM4 692 aaPredicted RBP12.23□□□□□ -0.45
NUP188-205ENST00000477069 PCDHGC3Q9UN70 934 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 GPR25O00155 361 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 TP73O15350 636 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 GH1P01241 217 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 IRAK1P51617 712 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 ZNF252P-AS1Q0IIN9 211 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 EAPPQ56P03 285 aaPredicted RBP12.23□□□□□ -0.45
NUP188-205ENST00000477069 PPP1R15BQ5SWA1 713 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 CDR2LQ86X02 465 aaPredicted RBP12.23□□□□□ -0.45
NUP188-205ENST00000477069 KATNAL2Q8IYT4 538 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 FAM212AQ96EL1 285 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 C16orf70Q9BSU1 422 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 PLVAPQ9BX97 442 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 CAPS2Q9BXY5 557 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 BCO2Q9BYV7 579 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 PARVAQ9NVD7 372 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 SIX4Q9UIU6 781 aa12.23□□□□□ -0.45
NUP188-205ENST00000477069 BTBD19C9JJ37 291 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 IL18RAPO95256 599 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 CXCL8P10145 99 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 BRD2P25440 801 aaKnown RBP12.22□□□□□ -0.45
NUP188-205ENST00000477069 CCNA1P78396 465 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 TFAMQ00059 246 aaKnown RBP12.22□□□□□ -0.45
NUP188-205ENST00000477069 ZNF699Q32M78 642 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 FEZF2Q8TBJ5 459 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 UBLCP1Q8WVY7 318 aaPredicted RBP12.22□□□□□ -0.45
NUP188-205ENST00000477069 TFAP2BQ92481 460 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 ART4Q93070 314 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 LRRC4CQ9HCJ2 640 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 CALCOCO1Q9P1Z2 691 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 TMEM191CA6NGB0 347 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 SNAI1O95863 264 aaPredicted RBP12.22□□□□□ -0.45
NUP188-205ENST00000477069 TMEM191BP0C7N4 346 aa12.22□□□□□ -0.45
NUP188-205ENST00000477069 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms