RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 GRK7Q8WTQ7 553 aa17.52■□□□□ 0.39
TMEM53-208ENST00000476724 CPA5Q8WXQ8 436 aa17.52■□□□□ 0.39
TMEM53-208ENST00000476724 CENPTQ96BT3 561 aa17.52■□□□□ 0.39
TMEM53-208ENST00000476724 E7EVH7 732 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 CLDN3O15551 220 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 VNN1O95497 513 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 ITIH2P19823 946 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 RRM1P23921 792 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 PPP1R7Q15435 360 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 TARBP2Q15633 366 aaKnown RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 CELF3Q5SZQ8 465 aaKnown RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 FAM160B1Q5W0V3 765 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 MON1BQ7L1V2 547 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 YTHDF3Q7Z739 585 aaKnown RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 TRIM50Q86XT4 487 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 CPNE8Q86YQ8 564 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 SEPT1Q8WYJ6 367 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 RNF25Q96BH1 459 aaPredicted RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 GPR20Q99678 358 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 CPA4Q9UI42 421 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 DOCK3Q8IZD9 2030 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 ADGRA2Q96PE1 1338 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 ASB14A6NK59 587 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 TRAPPC3O43617 180 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 PROSCO94903 275 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 TXNP10599 105 aaKnown RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 STAT5BP51692 787 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 SLC29A2Q14542 456 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 FAM110CQ1W6H9 321 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 GJC2Q5T442 439 aaPredicted RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 LMBRD2Q68DH5 695 aaPredicted RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 ZPBP2Q6X784 338 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 SAPCD2Q86UD0 394 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 PHF13Q86YI8 300 aaPredicted RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 ELMO3Q96BJ8 720 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 CYFIP2Q96F07 1278 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 TARS2Q9BW92 718 aaKnown RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 HAPLN2Q9GZV7 340 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 STMN4Q9H169 189 aaPredicted RBP17.51■□□□□ 0.39
TMEM53-208ENST00000476724 PCDHB4Q9Y5E5 795 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 SCINQ9Y6U3 715 aa17.51■□□□□ 0.39
TMEM53-208ENST00000476724 PSTPIP1O43586 416 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 ADCY3O60266 1144 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 CLTAP09496 248 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 EFNA5P52803 228 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 GRM1Q13255 1194 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 KCNV1Q6PIU1 500 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 TRMT10CQ7L0Y3 403 aaKnown RBP17.5■□□□□ 0.39
TMEM53-208ENST00000476724 ZBTB45Q96K62 511 aaPredicted RBP17.5■□□□□ 0.39
TMEM53-208ENST00000476724 PPANQ9NQ55 473 aaKnown RBP17.5■□□□□ 0.39
TMEM53-208ENST00000476724 PTPN22Q9Y2R2 807 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 IVNS1ABPQ9Y6Y0 642 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 CNTNAP2Q9UHC6 1331 aa17.5■□□□□ 0.39
TMEM53-208ENST00000476724 CAND2O75155 1236 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 KIAA0754O94854 1291 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 GNA15P30679 374 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 KCNJ1P48048 391 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 SEC24CP53992 1094 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 WNT7BP56706 349 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 NOMO3P69849 1222 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 CAV1Q03135 178 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 KCTD19Q17RG1 926 aaPredicted RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 TAPT1Q6NXT6 567 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 TADA2BQ86TJ2 420 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 DHX37Q8IY37 1157 aaKnown RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 EXOC8Q8IYI6 725 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 DDX27Q96GQ7 796 aaKnown RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 IMPG2Q9BZV3 1241 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 ROPN1BQ9BZX4 212 aaPredicted RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 SEMA4AQ9H3S1 761 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 ROPN1Q9HAT0 212 aaPredicted RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 ADAM22Q9P0K1 906 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 MEFVO15553 781 aaPredicted RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 STRNO43815 780 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 MAFO75444 373 aaPredicted RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 GAS8O95995 478 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 AGTP01019 485 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 MARK3P27448 753 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 C1QBPQ07021 282 aaKnown RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 GRB14Q14449 540 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 SPOPLQ6IQ16 392 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 PLEKHA7Q6IQ23 1121 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 TMEM270Q6UE05 265 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 RHOT1Q8IXI2 618 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 FAM167AQ96KS9 214 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 SPATA33Q96N06 139 aa17.49■□□□□ 0.39
TMEM53-208ENST00000476724 APOBEC3GQ9HC16 384 aaKnown RBP17.49■□□□□ 0.39
TMEM53-208ENST00000476724 PTPRJQ12913 1337 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 NOP56O00567 594 aaKnown RBP17.48■□□□□ 0.39
TMEM53-208ENST00000476724 RGS16O15492 202 aaPredicted RBP17.48■□□□□ 0.39
TMEM53-208ENST00000476724 RIPK2O43353 540 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 GAS2O43903 313 aaKnown RBP17.48■□□□□ 0.39
TMEM53-208ENST00000476724 CPP00450 1065 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 SHBGP04278 402 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 NOP14P78316 857 aaKnown RBP17.48■□□□□ 0.39
TMEM53-208ENST00000476724 KRT17Q04695 432 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 PTK6Q13882 451 aa17.48■□□□□ 0.39
TMEM53-208ENST00000476724 TTLL4Q14679 1199 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms