RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 DAB2IPQ5VWQ8 1189 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 COPS5Q92905 334 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 ZNF668Q96K58 619 aaPredicted RBP17.01■□□□□ 0.31
VARS2-207ENST00000476162 MTMR12Q9C0I1 747 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 PPME1Q9Y570 386 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 PLCB4Q15147 1175 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 EMC10Q5UCC4 262 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 TRIM72Q6ZMU5 477 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 PLPPR4Q7Z2D5 763 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 RHPN2Q8IUC4 686 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 WDR49Q8IV35 697 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 ZBTB8OSQ8IWT0 167 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 TRAPPC12Q8WVT3 735 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 OPTNQ96CV9 577 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 IMPG2Q9BZV3 1241 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 RABEP2Q9H5N1 569 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 ADAM22Q9P0K1 906 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 IGKV6-21A0A0C4DH24 114 aa17■□□□□ 0.31
VARS2-207ENST00000476162 FSCN2O14926 492 aa17■□□□□ 0.31
VARS2-207ENST00000476162 ASS1P00966 412 aaKnown RBP17■□□□□ 0.31
VARS2-207ENST00000476162 GJB1P08034 283 aa17■□□□□ 0.31
VARS2-207ENST00000476162 NF2P35240 595 aa17■□□□□ 0.31
VARS2-207ENST00000476162 SLC1A1P43005 524 aa17■□□□□ 0.31
VARS2-207ENST00000476162 PLVAPQ9BX97 442 aa17■□□□□ 0.31
VARS2-207ENST00000476162 LRRC37A2A6NM11 1700 aa17■□□□□ 0.31
VARS2-207ENST00000476162 ABLIM1O14639 778 aa17■□□□□ 0.31
VARS2-207ENST00000476162 OGTO15294 1046 aa17■□□□□ 0.31
VARS2-207ENST00000476162 GAS2O43903 313 aaKnown RBP17■□□□□ 0.31
VARS2-207ENST00000476162 NEBLO76041 1014 aa17■□□□□ 0.31
VARS2-207ENST00000476162 PAX7P23759 505 aa17■□□□□ 0.31
VARS2-207ENST00000476162 MYL6P60660 151 aa17■□□□□ 0.31
VARS2-207ENST00000476162 MCL1Q07820 350 aa17■□□□□ 0.31
VARS2-207ENST00000476162 PPIL2Q13356 520 aa17■□□□□ 0.31
VARS2-207ENST00000476162 MAMLD1Q13495 774 aa17■□□□□ 0.31
VARS2-207ENST00000476162 LIN9Q5TKA1 542 aa17■□□□□ 0.31
VARS2-207ENST00000476162 CCDC62Q6P9F0 684 aa17■□□□□ 0.31
VARS2-207ENST00000476162 RUFY4Q6ZNE9 571 aa17■□□□□ 0.31
VARS2-207ENST00000476162 C1orf54Q8WWF1 131 aa17■□□□□ 0.31
VARS2-207ENST00000476162 ZBTB10Q96DT7 871 aa17■□□□□ 0.31
VARS2-207ENST00000476162 A6NNZ2 444 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 PROSCO94903 275 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 POTEJP0CG39 1038 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 HPDP32754 393 aaPredicted RBP16.99■□□□□ 0.31
VARS2-207ENST00000476162 AP3M2P53677 418 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 GUCY1A3Q02108 690 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 CRYMQ14894 314 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 TUBB8Q3ZCM7 444 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.99■□□□□ 0.31
VARS2-207ENST00000476162 PHF13Q86YI8 300 aaPredicted RBP16.99■□□□□ 0.31
VARS2-207ENST00000476162 C12orf50Q8NA57 414 aaPredicted RBP16.99■□□□□ 0.31
VARS2-207ENST00000476162 ZNF606Q8WXB4 792 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 NLRP4Q96MN2 994 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 FHDC1Q9C0D6 1143 aaPredicted RBP16.99■□□□□ 0.31
VARS2-207ENST00000476162 LRRC19Q9H756 370 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 LRRC4CQ9HCJ2 640 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 PDGFCQ9NRA1 345 aa16.99■□□□□ 0.31
VARS2-207ENST00000476162 CPSF3Q9UKF6 684 aaKnown RBP16.99■□□□□ 0.31
VARS2-207ENST00000476162 H0YHG0 523 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 O00370 1275 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 ZEB2O60315 1214 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 TXNP10599 105 aaKnown RBP16.98■□□□□ 0.31
VARS2-207ENST00000476162 OSBPP22059 807 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 ZNF132P52740 706 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 PTP4A2Q12974 167 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 GRM1Q13255 1194 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 DUOXA2Q1HG44 320 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 SGO2Q562F6 1265 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 GPAT2Q6NUI2 795 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 B4GALNT4Q76KP1 1039 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 DDX27Q96GQ7 796 aaKnown RBP16.98■□□□□ 0.31
VARS2-207ENST00000476162 VCPIP1Q96JH7 1222 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 RUNDC3BQ96NL0 473 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 HERPUD2Q9BSE4 406 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 EPB41L4BQ9H329 900 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 CD58P19256 250 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 PMS2P54278 862 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 SNX1Q13596 522 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 SPDYCQ5MJ68 293 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 CDR2LQ86X02 465 aaPredicted RBP16.98■□□□□ 0.31
VARS2-207ENST00000476162 EXOC8Q8IYI6 725 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 THNSL1Q8IYQ7 743 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 OTUD6BQ8N6M0 293 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 UBR7Q8N806 425 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 C2orf40Q9H1Z8 148 aa16.98■□□□□ 0.31
VARS2-207ENST00000476162 MRPL47Q9HD33 250 aaKnown RBP16.98■□□□□ 0.31
VARS2-207ENST00000476162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.98■□□□□ 0.31
VARS2-207ENST00000476162 INO80B-WBP1J3KQ70 363 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 B4GALT5O43286 388 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 GJB6O95452 261 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 ECEL1O95672 775 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 GBP1P32455 592 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 INHBEP58166 350 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 OSTNP61366 133 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 IRX1P78414 480 aaPredicted RBP16.97■□□□□ 0.31
VARS2-207ENST00000476162 TFAMQ00059 246 aaKnown RBP16.97■□□□□ 0.31
VARS2-207ENST00000476162 IFFO1Q0D2I5 559 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 BIRC2Q13490 618 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 ZNF394Q53GI3 561 aa16.97■□□□□ 0.31
VARS2-207ENST00000476162 NAIF1Q69YI7 327 aaPredicted RBP16.97■□□□□ 0.31
VARS2-207ENST00000476162 PLEKHA7Q6IQ23 1121 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms