RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ZNF618Q5T7W0 954 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 LMBRD2Q68DH5 695 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 JADE1Q6IE81 842 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 LIMS2Q7Z4I7 341 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 LRRC52Q8N7C0 313 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 ANKLE1Q8NAG6 615 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 DDX1Q92499 740 aaKnown RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 KAT5Q92993 513 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 ANKRD36BP1Q96IX9 119 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 ZMAT2Q96NC0 199 aaKnown RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 TOX2Q96NM4 488 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 DEFB118Q96PH6 123 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 BCO2Q9BYV7 579 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 OSBPL7Q9BZF2 842 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 MTMR12Q9C0I1 747 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 TRPV6Q9H1D0 765 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 HAUS4Q9H6D7 363 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 SNTG2Q9NY99 539 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 NOCTQ9UK39 431 aaKnown RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 ITGA11Q9UKX5 1188 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 INTUQ9ULD6 942 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 PADI3Q9ULW8 664 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 PIN4Q9Y237 131 aaKnown RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 GINS2Q9Y248 185 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 IPPQ9Y573 584 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 NUB1Q9Y5A7 615 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 TRIP12Q14669 1992 aaPredicted RBP7.11□□□□□ -1.27
ATG4A-207ENST00000474825 FRMPD3Q5JV73 1810 aa7.11□□□□□ -1.27
ATG4A-207ENST00000474825 A0A087X0T9 212 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 SMIM28A0A1B0GU29 152 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 RCCD1A6NED2 376 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 DDX3XO00571 662 aaKnown RBP eCLIP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 PIRO00625 290 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 OFD1O75665 1012 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 RECQL4O94761 1208 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 MYCP01106 439 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 FAM163BP0C2L3 166 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 TMEM191BP0C7N4 346 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 FAM228BP0C875 321 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 CHRNB2P17787 502 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 LRPAP1P30533 357 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 SLC19A1P41440 591 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 PIK3CAP42336 1068 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 ASPAP45381 313 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 GJA8P48165 433 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 RAB27AP51159 221 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 VAV2P52735 878 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 BPIFB4P59827 614 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 MYL6P60660 151 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 OSTNP61366 133 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 ETF1P62495 437 aaKnown RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 NOP14P78316 857 aaKnown RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 BIRC3Q13489 604 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 TMEM132DQ14C87 1099 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 TCEAL1Q15170 157 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 NAB2Q15742 525 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 TMEM132AQ24JP5 1023 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 ZNF598Q86UK7 904 aaKnown RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 ZNF677Q86XU0 584 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 PPM1KQ8N3J5 372 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 ACRBPQ8NEB7 543 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 GSTCDQ8NEC7 633 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 LNX1Q8TBB1 728 aaPredicted RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 EPS8L1Q8TE68 723 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 FAM84AQ96KN4 292 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 DESI2Q9BSY9 194 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 PI4K2AQ9BTU6 479 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 NIF3L1Q9GZT8 377 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 RNF208Q9H0X6 261 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 ISCUQ9H1K1 167 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 CXCL16Q9H2A7 254 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 NXF3Q9H4D5 531 aaKnown RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 CYP3A43Q9HB55 503 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 RGS18Q9NS28 235 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 C1orf112Q9NSG2 853 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 FAM105AQ9NUU6 356 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 TRMT1Q9NXH9 659 aaKnown RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 MYO1AQ9UBC5 1043 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 NAGPAQ9UK23 515 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 UBQLN1Q9UMX0 589 aaKnown RBP7.1□□□□□ -1.27
ATG4A-207ENST00000474825 GIT1Q9Y2X7 761 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 PCDHB2Q9Y5E7 798 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 PCDHA13Q9Y5I0 950 aa7.1□□□□□ -1.27
ATG4A-207ENST00000474825 UMODL1Q5DID0 1318 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 A0A0U1RQJ8 604 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 C9IYK1 514 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 C3orf80F5H4A9 247 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PTGESO14684 152 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 CYP26A1O43174 497 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 AKR1B10O60218 316 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 MGEA5O60502 916 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PHACTR2O75167 634 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PARNO95453 639 aaKnown RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 EOMESO95936 686 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 CXCL10P02778 98 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 CTSHP09668 335 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 PNMA6AP0CW24 399 aaPredicted RBP7.09□□□□□ -1.27
ATG4A-207ENST00000474825 GHRP10912 638 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 GZMAP12544 262 aa7.09□□□□□ -1.27
ATG4A-207ENST00000474825 SKIP12755 728 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms