RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PGLYRP2Q96PD5 576 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 PARD6AQ9NPB6 346 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 AFF4Q9UHB7 1163 aaKnown RBP15.28■□□□□ 0.04
CCDC78-209ENST00000474647 STK24Q9Y6E0 443 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 LAMA1P25391 3075 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 TPRP12270 2363 aaKnown RBP15.28■□□□□ 0.04
CCDC78-209ENST00000474647 EPG5Q9HCE0 2579 aa15.28■□□□□ 0.04
CCDC78-209ENST00000474647 DCDC2BA2VCK2 349 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 SFI1A8K8P3 1242 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 ABLIM1O14639 778 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 MEFVO15553 781 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-209ENST00000474647 MOSPD3O75425 235 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 OR4Q2P0C623 313 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 CXCL8P10145 99 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 TDGF1P13385 188 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 PROZP22891 400 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 CCNE1P24864 410 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 TRAPPC10P48553 1259 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 YWHAHQ04917 246 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-209ENST00000474647 SPAG1Q07617 926 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 MAPK7Q13164 816 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 PTGDRQ13258 359 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 YAF2Q8IY57 180 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 ZNF687Q8N1G0 1237 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 C4orf32Q8N8J7 132 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 IGSF22Q8N9C0 903 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 LEMD2Q8NC56 503 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 FBXO18Q8NFZ0 1043 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 IER2Q9BTL4 223 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 PCDHB8Q9UN66 801 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 RBM19Q9Y4C8 960 aaKnown RBP15.27■□□□□ 0.04
CCDC78-209ENST00000474647 YIPF1Q9Y548 306 aa15.27■□□□□ 0.04
CCDC78-209ENST00000474647 TIMM13Q9Y5L4 95 aaPredicted RBP15.27■□□□□ 0.04
CCDC78-209ENST00000474647 MAP1BP46821 2468 aaKnown RBP15.26■□□□□ 0.03
CCDC78-209ENST00000474647 HELZP42694 1942 aaKnown RBP15.26■□□□□ 0.03
CCDC78-209ENST00000474647 A0A1W2PRU2 124 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 SLC38A8A6NNN8 435 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 HEPACAM2A8MVW5 462 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 CDC25AP30304 524 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
CCDC78-209ENST00000474647 SATB1Q01826 763 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 PDIA5Q14554 519 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 LAIR1Q6GTX8 287 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 RINT1Q6NUQ1 792 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 GPIHBP1Q8IV16 184 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 MFSD6LQ8IWD5 586 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 SHKBP1Q8TBC3 707 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 RTKNQ9BST9 563 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 LIMCH1Q9UPQ0 1083 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 PCDHB6Q9Y5E3 794 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.26■□□□□ 0.03
CCDC78-209ENST00000474647 ACACBO00763 2458 aa15.26■□□□□ 0.03
CCDC78-209ENST00000474647 TOM1L1O75674 476 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 CXCL12P48061 93 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 SOX9P48436 509 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 PLD1Q13393 1074 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 SLC10A6Q3KNW5 377 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 C1orf186Q6ZWK4 172 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.25■□□□□ 0.03
CCDC78-209ENST00000474647 USP37Q86T82 979 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 CELF5Q8N6W0 485 aaKnown RBP15.25■□□□□ 0.03
CCDC78-209ENST00000474647 BICD1Q96G01 975 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 LLPHQ9BRT6 129 aaKnown RBP15.25■□□□□ 0.03
CCDC78-209ENST00000474647 C17orf75Q9HAS0 396 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 TRPV5Q9NQA5 729 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 RBM12Q9NTZ6 932 aaKnown RBP15.25■□□□□ 0.03
CCDC78-209ENST00000474647 MAFFQ9ULX9 164 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 SDK1Q7Z5N4 2213 aa15.25■□□□□ 0.03
CCDC78-209ENST00000474647 CLDN3O15551 220 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 CHRNB1P11230 501 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 TGM1P22735 817 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 SMTNP53814 917 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 EPHB3P54753 998 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 EPHA5P54756 1037 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 HMGN5P82970 282 aaKnown RBP15.24■□□□□ 0.03
CCDC78-209ENST00000474647 SIM2Q14190 667 aaPredicted RBP15.24■□□□□ 0.03
CCDC78-209ENST00000474647 LRRC32Q14392 662 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 STXBP5Q5T5C0 1151 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 HEATR6Q6AI08 1181 aaKnown RBP15.24■□□□□ 0.03
CCDC78-209ENST00000474647 DSTYKQ6XUX3 929 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 TTC8Q8TAM2 541 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 FAM200AQ8TCP9 573 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 E2F7Q96AV8 911 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 RSPRY1Q96DX4 576 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 KIF12Q96FN5 646 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 GPR88Q9GZN0 384 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 TRPV4Q9HBA0 871 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 NUP205Q92621 2012 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 CHD8Q9HCK8 2581 aa15.24■□□□□ 0.03
CCDC78-209ENST00000474647 ANAPC1Q9H1A4 1944 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.23■□□□□ 0.03
CCDC78-209ENST00000474647 CHURC1-FNTBB4DL54 471 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 M0QZQ0 153 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 ARNTLO00327 626 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 KRT37O76014 449 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 VNN2O95498 520 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 MAPTP10636 758 aaKnown RBP15.23■□□□□ 0.03
CCDC78-209ENST00000474647 PLS3P13797 630 aa15.23■□□□□ 0.03
CCDC78-209ENST00000474647 KCNA4P22459 653 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms