RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 FGFR3P22607 806 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 TKTP29401 623 aaKnown RBP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 PNPLA4P41247 253 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 AARSP49588 968 aaKnown RBP eCLIP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 DSG1Q02413 1049 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 TRPC3Q13507 836 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 BMS1Q14692 1282 aaKnown RBP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 PTPN14Q15678 1187 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 ZACNQ401N2 412 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 SV2CQ496J9 727 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 C15orf39Q6ZRI6 1047 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 LRRC52Q8N7C0 313 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 ENOX1Q8TC92 643 aaKnown RBP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 RIN2Q8WYP3 895 aaPredicted RBP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 HPDLQ96IR7 371 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 ZNF560Q96MR9 790 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 THAP9Q9H5L6 903 aa19.53■□□□□ 0.72
SNRPB-203ENST00000474384 MRPL17Q9NRX2 175 aaKnown RBP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 PRRC2BQ5JSZ5 2229 aaKnown RBP19.53■□□□□ 0.72
SNRPB-203ENST00000474384 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.52■□□□□ 0.72
SNRPB-203ENST00000474384 C2orf71A6NGG8 1288 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 KPNA7A9QM74 516 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 M0QZQ0 153 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 STX10O60499 249 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 LILRB3O75022 631 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 VNN1O95497 513 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 PAX3P23760 479 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 MARSP56192 900 aaKnown RBP19.52■□□□□ 0.72
SNRPB-203ENST00000474384 MYO1EQ12965 1108 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 NCOA4Q13772 614 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 HSP90AA4PQ58FG1 418 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 PRSS55Q6UWB4 352 aaPredicted RBP19.52■□□□□ 0.72
SNRPB-203ENST00000474384 ADGRD2Q7Z7M1 963 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 SLC35C1Q96A29 364 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 SENP8Q96LD8 212 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 CNOT6LQ96LI5 555 aaKnown RBP19.52■□□□□ 0.72
SNRPB-203ENST00000474384 NSUN3Q9H649 340 aaKnown RBP19.52■□□□□ 0.72
SNRPB-203ENST00000474384 TMEM8AQ9HCN3 771 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 SAMSN1Q9NSI8 373 aaKnown RBP19.52■□□□□ 0.72
SNRPB-203ENST00000474384 PCDHB8Q9UN66 801 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 NFE2L3Q9Y4A8 694 aa19.52■□□□□ 0.72
SNRPB-203ENST00000474384 TIMM13Q9Y5L4 95 aaPredicted RBP19.52■□□□□ 0.72
SNRPB-203ENST00000474384 VWA8A3KMH1 1905 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 CYB561D2O14569 222 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 SYN3O14994 580 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 GTF2H1P32780 548 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 MYL6P60660 151 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 CCDC85BQ15834 202 aaPredicted RBP19.51■□□□□ 0.71
SNRPB-203ENST00000474384 TCEAL5Q5H9L2 206 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 RBM23Q86U06 439 aaKnown RBP19.51■□□□□ 0.71
SNRPB-203ENST00000474384 TRIM59Q8IWR1 403 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 LNX1Q8TBB1 728 aaPredicted RBP19.51■□□□□ 0.71
SNRPB-203ENST00000474384 NAT10Q9H0A0 1025 aaKnown RBP19.51■□□□□ 0.71
SNRPB-203ENST00000474384 SSX2IPQ9Y2D8 614 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 IRAK3Q9Y616 596 aa19.51■□□□□ 0.71
SNRPB-203ENST00000474384 PER2O15055 1255 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 HLA-DRAP01903 254 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 PSMD5Q16401 504 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 CBWD6Q4V339 395 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 CBWD3Q5JTY5 395 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 CBWD5Q5RIA9 395 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 KRT39Q6A163 491 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 APPL2Q8NEU8 664 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 TAS1R2Q8TE23 839 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 PPM1EQ8WY54 764 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 PIK3R5Q8WYR1 880 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 ELMO3Q96BJ8 720 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 TLE6Q9H808 572 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.5■□□□□ 0.71
SNRPB-203ENST00000474384 SNX9Q9Y5X1 595 aa19.5■□□□□ 0.71
SNRPB-203ENST00000474384 CNPP09543 421 aaKnown RBP19.49■□□□□ 0.71
SNRPB-203ENST00000474384 ODC1P11926 461 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 RPL17P18621 184 aaKnown RBP19.49■□□□□ 0.71
SNRPB-203ENST00000474384 ATICP31939 592 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 PIK3CAP42336 1068 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 NRIP1P48552 1158 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 MXI1P50539 228 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 MYL5Q02045 173 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 VARS2Q5ST30 1063 aaKnown RBP19.49■□□□□ 0.71
SNRPB-203ENST00000474384 FAM114A1Q8IWE2 563 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 GPR65Q8IYL9 337 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 KLHL5Q96PQ7 755 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 XYLT2Q9H1B5 865 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 IGFLR1Q9H665 355 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 RXFP1Q9HBX9 757 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.49■□□□□ 0.711e-7■■■■■ 87.7
SNRPB-203ENST00000474384 FANCLQ9NW38 375 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 GDAP2Q9NXN4 497 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 MAGEC2Q9UBF1 373 aaPredicted RBP19.49■□□□□ 0.71
SNRPB-203ENST00000474384 EYSQ5T1H1 3165 aa19.49■□□□□ 0.71
SNRPB-203ENST00000474384 CLSTN1O94985 981 aa19.48■□□□□ 0.71
SNRPB-203ENST00000474384 GTF2F1P35269 517 aaKnown RBP eCLIP19.48■□□□□ 0.711e-6■□□□□ 8.3
SNRPB-203ENST00000474384 MTIF2P46199 727 aaKnown RBP19.48■□□□□ 0.71
SNRPB-203ENST00000474384 FMO5P49326 533 aa19.48■□□□□ 0.71
SNRPB-203ENST00000474384 ZNF165P49910 485 aa19.48■□□□□ 0.71
SNRPB-203ENST00000474384 HYAL1Q12794 435 aa19.48■□□□□ 0.71
SNRPB-203ENST00000474384 MRPL58Q14197 206 aaKnown RBP19.48■□□□□ 0.71
SNRPB-203ENST00000474384 SGSM1Q2NKQ1 1148 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms