RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	GMEB2	Q9UKD1	530 aa		10.54	□□□□□ -0.72
MCF2L-223	ENST00000473345	ANTXRL	A6NF34	631 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	OTOL1	A6NHN0	477 aa	Predicted RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	MAN2B1	O00754	1011 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	SYN3	O14994	580 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	EXTL3	O43909	919 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	HIP1R	O75146	1068 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	RET	P07949	1114 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	OR52Z1	P0C646	297 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	HARS	P12081	509 aa	Known RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	TNFSF9	P41273	254 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	CXCL12	P48061	93 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	TOB1	P50616	345 aa	Predicted RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	FCHO2	Q0JRZ9	810 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	CSRP2	Q16527	193 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	NETO1	Q8TDF5	533 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	LRRC15	Q8TF66	581 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	IRF7	Q92985	503 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	BORCS6	Q96GS4	357 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	SMG9	Q9H0W8	520 aa	Known RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	DDX19A	Q9NUU7	478 aa	Known RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	AFF4	Q9UHB7	1163 aa	Known RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	KIAA1024	Q9UPX6	916 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	SLC27A5	Q9Y2P5	690 aa		10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	MRPS17	Q9Y2R5	130 aa	Known RBP	10.53	□□□□□ -0.72
MCF2L-223	ENST00000473345	MYBPHL	A2RUH7	354 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	SPECC1L-ADORA2A	F8WAN1	911 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345		K7ERI5	159 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	ZNF263	O14978	683 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	SLC16A4	O15374	487 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	PAPSS2	O95340	614 aa	Predicted RBP	10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	PML	P29590	882 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	ELF1	P32519	619 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	CTH	P32929	405 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCT6A	P40227	531 aa	Known RBP	10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCR3	P51677	355 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	EFNA5	P52803	228 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	DUSP4	Q13115	394 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCIN	Q13939	588 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	PON2	Q15165	354 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	ZBTB6	Q15916	424 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	TPGS2	Q68CL5	300 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	SCARA3	Q6AZY7	606 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	C1orf186	Q6ZWK4	172 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	SPEM1	Q8N4L4	309 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	ATAD1	Q8NBU5	361 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	PHLPP2	Q6ZVD8	1323 aa		10.52	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCDC169	A6NNP5	214 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345		M0QZQ0	153 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	ZNF197	O14709	1029 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	TRAPPC3	O43617	180 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	FAM189A1	O60320	539 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	CXCL8	P10145	99 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	MCF2	P10911	925 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	HOXB3	P14651	431 aa	Predicted RBP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	SDHB	P21912	280 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	MCM4	P33991	863 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	AARS	P49588	968 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	FXR2	P51116	673 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	CYP4F8	P98187	520 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	RAD51AP2	Q09MP3	1159 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	PPP2R5A	Q15172	486 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	CYP4A22	Q5TCH4	519 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	TCEAL6	Q6IPX3	200 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	ZNF280D	Q6N043	979 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	RINT1	Q6NUQ1	792 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	MPZL3	Q6UWV2	235 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	KBTBD6	Q86V97	674 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	STKLD1	Q8NE28	680 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	OR10T2	Q8NGX3	314 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	DEPDC1B	Q8WUY9	529 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	WASF1	Q92558	559 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	EZH1	Q92800	747 aa	Predicted RBP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	SECISBP2L	Q93073	1101 aa	Known RBP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	TCEAL3	Q969E4	200 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	ZNF512	Q96ME7	567 aa	Predicted RBP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	ACAP3	Q96P50	834 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	LPIN3	Q9BQK8	851 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	CCDC94	Q9BW85	323 aa	Predicted RBP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	TMEM134	Q9H6X4	195 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	IL21	Q9HBE4	155 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	BRMS1	Q9HCU9	246 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	PCDHB8	Q9UN66	801 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	CHD8	Q9HCK8	2581 aa		10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	PDCD11	Q14690	1871 aa	Known RBP	10.51	□□□□□ -0.73
MCF2L-223	ENST00000473345	NPHP3-ACAD11	A0A0J9YXS1	232 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	TTC26	A0AVF1	554 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	MTMR11	A4FU01	709 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345		H7C4K7	107 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	AXIN1	O15169	862 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	CHAD	O15335	359 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	OAZ2	O95190	189 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	SEC24B	O95487	1268 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	CPB1	P15086	417 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	ATF6	P18850	670 aa		10.5	□□□□□ -0.73
MCF2L-223	ENST00000473345	RPL9	P32969	192 aa	Known RBP	10.5	□□□□□ -0.73

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