RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 DLL3Q9NYJ7 618 aa12.23□□□□□ -0.45
ACTB-209ENST00000473257 AFF4Q9UHB7 1163 aaKnown RBP12.23□□□□□ -0.45
ACTB-209ENST00000473257 PCDHB8Q9UN66 801 aa12.23□□□□□ -0.45
ACTB-209ENST00000473257 PCDHGA2Q9Y5H1 932 aa12.23□□□□□ -0.45
ACTB-209ENST00000473257 PIAS3Q9Y6X2 628 aa12.23□□□□□ -0.45
ACTB-209ENST00000473257 A0A1W2PRU2 124 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 DCDC2BA2VCK2 349 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 SLC38A8A6NNN8 435 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 HEPACAM2A8MVW5 462 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 LACTBL1A8MY62 500 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 LILRB5O75023 590 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 TOM1L1O75674 476 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 PLS3P13797 630 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 CCNE1P24864 410 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 RPL9P32969 192 aaKnown RBP12.22□□□□□ -0.45
ACTB-209ENST00000473257 SATB1Q01826 763 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 STRN3Q13033 797 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 DUSP4Q13115 394 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 DHX8Q14562 1220 aaKnown RBP12.22□□□□□ -0.45
ACTB-209ENST00000473257 ARSHQ5FYA8 562 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 DTHD1Q6ZMT9 781 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 Q6ZS52 159 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 ATAD1Q8NBU5 361 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 FAM3CQ92520 227 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 NELL1Q92832 810 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 FAM212AQ96EL1 285 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 ZNF512Q96ME7 567 aaPredicted RBP12.22□□□□□ -0.45
ACTB-209ENST00000473257 LRRC3Q9BY71 257 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 EPC1Q9H2F5 836 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.22□□□□□ -0.45
ACTB-209ENST00000473257 USP18Q9UMW8 372 aa12.22□□□□□ -0.45
ACTB-209ENST00000473257 RBM19Q9Y4C8 960 aaKnown RBP12.22□□□□□ -0.45
ACTB-209ENST00000473257 PDCD11Q14690 1871 aaKnown RBP12.22□□□□□ -0.45
ACTB-209ENST00000473257 VWA3AA6NCI4 1184 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 TISP43B9A030 160 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 ZNF197O14709 1029 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 SPTLC1O15269 473 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 PLA2G4BP0C869 781 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 TGM1P22735 817 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 GUCY2CP25092 1073 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 MARCKSP29966 332 aaPredicted RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 RPS9P46781 194 aaKnown RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 ATXN1P54253 815 aaKnown RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 SLC12A3P55017 1021 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 HMGN5P82970 282 aaKnown RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 MCL1Q07820 350 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 ENOX2Q16206 610 aaKnown RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 TPGS2Q68CL5 300 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 HEATR6Q6AI08 1181 aaKnown RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 IQCEQ6IPM2 695 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 TXNDC11Q6PKC3 985 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 RTL10Q7L3V2 364 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 TMC8Q8IU68 726 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 ELMOD1Q8N336 334 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 APPL2Q8NEU8 664 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 DNASE1L2Q92874 299 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 BICD1Q96G01 975 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 SMG9Q9H0W8 520 aaKnown RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 CHRDQ9H2X0 955 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 ASAH2Q9NR71 780 aa12.21□□□□□ -0.45
ACTB-209ENST00000473257 MAP1BP46821 2468 aaKnown RBP12.21□□□□□ -0.45
ACTB-209ENST00000473257 LAMA1P25391 3075 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 CNOT1A5YKK6 2376 aaKnown RBP12.2□□□□□ -0.46
ACTB-209ENST00000473257 MYH11P35749 1972 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 TTC26A0AVF1 554 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 CHURC1-FNTBB4DL54 471 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 M0QZQ0 153 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 ARNTLO00327 626 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 ZNF263O14978 683 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 CLDN3O15551 220 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 PSMC3P17980 439 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 FNTBP49356 437 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 YWHAHQ04917 246 aaPredicted RBP12.2□□□□□ -0.46
ACTB-209ENST00000473257 SPEM2Q0P670 501 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 ZBTB6Q15916 424 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 DSTYKQ6XUX3 929 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 PRR23BQ6ZRT6 265 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 STKLD1Q8NE28 680 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 SPIRE2Q8WWL2 714 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 FAM84AQ96KN4 292 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 ZSCAN31Q96LW9 406 aaPredicted RBP12.2□□□□□ -0.46
ACTB-209ENST00000473257 NELL2Q99435 816 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 LPIN3Q9BQK8 851 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 NTPCRQ9BSD7 190 aaKnown RBP12.2□□□□□ -0.46
ACTB-209ENST00000473257 RAB34Q9BZG1 259 aa12.2□□□□□ -0.46
ACTB-209ENST00000473257 POLR3BQ9NW08 1133 aaPredicted RBP12.2□□□□□ -0.46
ACTB-209ENST00000473257 MRPS17Q9Y2R5 130 aaKnown RBP12.2□□□□□ -0.46
ACTB-209ENST00000473257 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.2□□□□□ -0.46
ACTB-209ENST00000473257 KMT2BQ9UMN6 2715 aaPredicted RBP12.19□□□□□ -0.46
ACTB-209ENST00000473257 ANK1P16157 1881 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 CEP295Q9C0D2 2601 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 TULP1O00294 542 aaPredicted RBP12.19□□□□□ -0.46
ACTB-209ENST00000473257 MAN2B1O00754 1011 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 NCAM2O15394 837 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 FAM189A1O60320 539 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 OAZ2O95190 189 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 CD2BP2O95400 341 aaKnown RBP12.19□□□□□ -0.46
ACTB-209ENST00000473257 PRAMEF12O95522 483 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 NFICP08651 508 aa12.19□□□□□ -0.46
ACTB-209ENST00000473257 CLTAP09496 248 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms