RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 EZH1Q92800 747 aaPredicted RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 DDX17Q92841 729 aaKnown RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 ZNF566Q969W8 418 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 RILPL2Q969X0 211 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 BICD1Q96G01 975 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 CLMNQ96JQ2 1002 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 RUNDC3BQ96NL0 473 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 NEK1Q96PY6 1258 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 UIMC1Q96RL1 719 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 EMILIN2Q9BXX0 1053 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 SENP6Q9GZR1 1112 aaPredicted RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 PAIP1Q9H074 479 aaKnown RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 KLHL25Q9H0H3 589 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 GBP3Q9H0R5 595 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 MCM9Q9NXL9 1143 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 ZMAT5Q9UDW3 170 aaKnown RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 HPCAL4Q9UM19 191 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 GPR45Q9Y5Y3 372 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 CCNB3Q8WWL7 1395 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 CAMSAP2Q08AD1 1489 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 CCDC196A0A1B0GTZ2 297 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 A0A1W2PPL8 197 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 DDX39AO00148 427 aaKnown RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 NPC1O15118 1278 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 TXNL1O43396 289 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 TGM5O43548 720 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 PLA2G6O60733 806 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 SOCS5O75159 536 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 SLC22A3O75751 556 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 ENDOD1O94919 500 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 NEFHP12036 1026 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 OSMP13725 252 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 TNNT1P13805 278 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 TFEBP19484 476 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 HLA-DPA1P20036 260 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 AGXTP21549 392 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 FGFR4P22455 802 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 CCNCP24863 283 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 CTSSP25774 331 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 PBLDP30039 288 aaPredicted RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 SERPINF1P36955 418 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 RBM6P78332 1123 aaKnown RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 RBP5P82980 135 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 SRSF2Q01130 221 aaKnown RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 MAP4K2Q12851 820 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 MAP3K12Q12852 859 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 BFSP1Q12934 665 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 SNAPC2Q13487 334 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 AUHQ13825 339 aaKnown RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 TMEM177Q53S58 311 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 WIPI1Q5MNZ9 446 aaPredicted RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 FAM26FQ5R3K3 315 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 ACAD10Q6JQN1 1059 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 SLC22A25Q6T423 547 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 ZAR1Q86SH2 424 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.52□□□□□ -1.37
RTF1-203ENST00000473214 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.52□□□□□ -1.37
RTF1-203ENST00000473214 NGEFQ8N5V2 710 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 EFHBQ8N7U6 833 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 KCTD6Q8NC69 237 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 C2CD4AQ8NCU7 369 aaPredicted RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 TTLL11Q8NHH1 800 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 FBLIM1Q8WUP2 373 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 ST8SIA4Q92187 359 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 COA7Q96BR5 231 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 C18orf8Q96DM3 657 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 MRGPRX3Q96LB0 322 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 SLC6A18Q96N87 628 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 TMEM237Q96Q45 408 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 HGH1Q9BTY7 390 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 USP26Q9BXU7 913 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 STK33Q9BYT3 514 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 VPS37BQ9H9H4 285 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 EIF2B3Q9NR50 452 aaKnown RBP6.52□□□□□ -1.37
RTF1-203ENST00000473214 STK26Q9P289 416 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 SLC39A10Q9ULF5 831 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 AKT3Q9Y243 479 aa6.52□□□□□ -1.37
RTF1-203ENST00000473214 NT5C1B-RDH14C9J2C7 533 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 CYP26A1O43174 497 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 PPM1BO75688 479 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 ZNF865P0CJ78 1059 aaPredicted RBP6.51□□□□□ -1.37
RTF1-203ENST00000473214 EEF1GP26641 437 aaKnown RBP6.51□□□□□ -1.37
RTF1-203ENST00000473214 PSMC4P43686 418 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 USP11P51784 963 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 GFRA1P56159 465 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 CCT2P78371 535 aaKnown RBP6.51□□□□□ -1.37
RTF1-203ENST00000473214 ADCY2Q08462 1091 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 CHAF1BQ13112 559 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 PRPF4BQ13523 1007 aaKnown RBP6.51□□□□□ -1.37
RTF1-203ENST00000473214 COG2Q14746 738 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 NAA25Q14CX7 972 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 ATP2B3Q16720 1220 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 TTC39AQ5SRH9 613 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 WDR73Q6P4I2 378 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 POMZP3Q6PJE2 187 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 MPRIPQ6WCQ1 1025 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 DEFB132Q7Z7B7 95 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 SLFN11Q7Z7L1 901 aa6.51□□□□□ -1.37
RTF1-203ENST00000473214 TRIM59Q8IWR1 403 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms