RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 MFSD14AQ96MC6 490 aa16.88■□□□□ 0.29
MRPL55-226ENST00000473066 SCAND2PQ9GZW5 306 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-226ENST00000473066 CYP4F11Q9HBI6 524 aa16.88■□□□□ 0.29
MRPL55-226ENST00000473066 DPP3Q9NY33 737 aa16.88■□□□□ 0.29
MRPL55-226ENST00000473066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.88■□□□□ 0.29
MRPL55-226ENST00000473066 USP25Q9UHP3 1055 aa16.88■□□□□ 0.29
MRPL55-226ENST00000473066 R3HCC1Q9Y3T6 440 aaKnown RBP16.88■□□□□ 0.29
MRPL55-226ENST00000473066 GOLGA8IPA6NC78 632 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 GOLGA8JA6NMD2 632 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 EXTL3O43909 919 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 POU2F2P09086 479 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 AARSP49588 968 aaKnown RBP eCLIP16.87■□□□□ 0.29
MRPL55-226ENST00000473066 TAF6P49848 677 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 TFAMQ00059 246 aaKnown RBP16.87■□□□□ 0.29
MRPL55-226ENST00000473066 MRPL58Q14197 206 aaKnown RBP16.87■□□□□ 0.29
MRPL55-226ENST00000473066 SV2CQ496J9 727 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 OVOS1Q6IE37 1185 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 CRELD2Q6UXH1 353 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-226ENST00000473066 HS2ST1Q7LGA3 356 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 METTL23Q86XA0 190 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 GPD1LQ8N335 351 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 ELMOD1Q8N336 334 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 TMEM130Q8N3G9 435 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 CACTINQ8WUQ7 758 aaKnown RBP16.87■□□□□ 0.29
MRPL55-226ENST00000473066 HPS3Q969F9 1004 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 PBXIP1Q96AQ6 731 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 CBWD1Q9BRT8 395 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 BLZF1Q9H2G9 400 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 PCIF1Q9H4Z3 704 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 IGSF9Q9P2J2 1179 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
MRPL55-226ENST00000473066 PVALEFA0A1B0GWK0 134 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 OR6C75A6NL08 312 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 PPEF2O14830 753 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 TMEM191BP0C7N4 346 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 SLFN14P0C7P3 912 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 ATF2P15336 505 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 PFKFB1P16118 471 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 TYMPP19971 482 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 PNPLA4P41247 253 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 LILRA4P59901 499 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 PABPC1LQ4VXU2 614 aaKnown RBP16.86■□□□□ 0.29
MRPL55-226ENST00000473066 HFE2Q6ZVN8 426 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 EFCAB13Q8IY85 973 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 CCDC47Q96A33 483 aaKnown RBP16.86■□□□□ 0.29
MRPL55-226ENST00000473066 SENP8Q96LD8 212 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 EXOC1Q9NV70 894 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 AFF4Q9UHB7 1163 aaKnown RBP16.86■□□□□ 0.29
MRPL55-226ENST00000473066 DSEQ9UL01 958 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 ZDHHC9Q9Y397 364 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 TIMM13Q9Y5L4 95 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-226ENST00000473066 ZFP37Q9Y6Q3 630 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-226ENST00000473066 KMT2EQ8IZD2 1858 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 NOTCH4Q99466 2003 aa16.86■□□□□ 0.29
MRPL55-226ENST00000473066 A0A1B0GVL5 298 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 ANO9A1A5B4 782 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 TBC1D4O60343 1298 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 ABLIM3O94929 683 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 OAZ2O95190 189 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 CMA1P23946 247 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 CASP1P29466 404 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 ADCY1Q08828 1119 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 TDGQ13569 410 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 CUL4BQ13620 913 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 SURF1Q15526 300 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 BMP8AQ7Z5Y6 402 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 TCEAL8Q8IYN2 117 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 GLIS3Q8NEA6 775 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 NXPE3Q969Y0 559 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 CCDC34Q96HJ3 373 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 MYADMQ96S97 322 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 KIAA1586Q9HCI6 787 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 EPS15L1Q9UBC2 864 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 MAFFQ9ULX9 164 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 INSL5Q9Y5Q6 135 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
MRPL55-226ENST00000473066 ZNF233A6NK53 670 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 PIRO00625 290 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 SYKP43405 635 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 NTHL1P78549 312 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 NELFCDQ8IXH7 590 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 GRAMD1CQ8IYS0 662 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 ZNF507Q8TCN5 953 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 ANKRD36BP1Q96IX9 119 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 KCNK12Q9HB15 430 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 HSPBP1Q9NZL4 362 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 RAPGEFL1Q9UHV5 662 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 CDH7Q9ULB5 785 aa16.84■□□□□ 0.29
MRPL55-226ENST00000473066 CYB561D2O14569 222 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 ACTN4O43707 911 aaKnown RBP16.83■□□□□ 0.28
MRPL55-226ENST00000473066 N4BP1O75113 896 aaKnown RBP16.83■□□□□ 0.28
MRPL55-226ENST00000473066 TNNC2P02585 160 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 ITGB3P05106 788 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 MYL1P05976 194 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 KRT19P08727 400 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 LAMP2P13473 410 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 PTPN2P17706 415 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 POLR2BP30876 1174 aaKnown RBP16.83■□□□□ 0.28
MRPL55-226ENST00000473066 CYP2J2P51589 502 aa16.83■□□□□ 0.28
MRPL55-226ENST00000473066 SNRPFP62306 86 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms