RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 DERAQ9Y315 318 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 SIT1Q9Y3P8 196 aa16.61■□□□□ 0.25
VTI1A-203ENST00000472892 TIMM13Q9Y5L4 95 aaPredicted RBP16.61■□□□□ 0.25
VTI1A-203ENST00000472892 PDCD11Q14690 1871 aaKnown RBP16.61■□□□□ 0.25
VTI1A-203ENST00000472892 PIRO00625 290 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 GFRA3O60609 400 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 PPP1R37O75864 691 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 TYMPP19971 482 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 RFX1P22670 979 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 PAX3P23760 479 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 GUCY2FP51841 1108 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 LILRA4P59901 499 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 CEBPZQ03701 1054 aaKnown RBP16.6■□□□□ 0.25
VTI1A-203ENST00000472892 SLC39A14Q15043 492 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 ADALQ6DHV7 355 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 JADE1Q6IE81 842 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 DSTYKQ6XUX3 929 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 SV2BQ7L1I2 683 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 DYMQ7RTS9 669 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 DNAJC19Q96DA6 116 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 FAM212AQ96EL1 285 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 SHDQ96IW2 340 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 ZNF512Q96ME7 567 aaPredicted RBP16.6■□□□□ 0.25
VTI1A-203ENST00000472892 KXD1Q9BQD3 176 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 ASB7Q9H672 318 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 DLGAP2Q9P1A6 1054 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 SEL1LQ9UBV2 794 aa16.6■□□□□ 0.25
VTI1A-203ENST00000472892 DMDP11532 3685 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 ANO9A1A5B4 782 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 MYMKA6NI61 221 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 OR6C75A6NL08 312 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 TISP43B9A030 160 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 ZNF197O14709 1029 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 PPEF2O14830 753 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 CPB1P15086 417 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 CEBPBP17676 345 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 TXLNAP40222 546 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 ACOT2P49753 483 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 PFKPQ01813 784 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 TWF1Q12792 350 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 GPR17Q13304 367 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 SNW1Q13573 536 aaKnown RBP16.59■□□□□ 0.25
VTI1A-203ENST00000472892 ANGPT1Q15389 498 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 SLC44A4Q53GD3 710 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 CYP4A22Q5TCH4 519 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 USP37Q86T82 979 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 SFR1Q86XK3 245 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 HVCN1Q96D96 273 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 TCEAL4Q96EI5 215 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 USP28Q96RU2 1077 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 DDX23Q9BUQ8 820 aaKnown RBP16.59■□□□□ 0.25
VTI1A-203ENST00000472892 PLA2G2FQ9BZM2 168 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 ZSCAN16Q9H4T2 348 aaPredicted RBP16.59■□□□□ 0.25
VTI1A-203ENST00000472892 CEP72Q9P209 647 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 AGO2Q9UKV8 859 aaKnown RBP16.59■□□□□ 0.25
VTI1A-203ENST00000472892 C2CD2Q9Y426 696 aa16.59■□□□□ 0.25
VTI1A-203ENST00000472892 ZFHX2Q9C0A1 2572 aaPredicted RBP16.59■□□□□ 0.25
VTI1A-203ENST00000472892 SPTLC1O15269 473 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 VNN2O95498 520 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 NFICP08651 508 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 GAP43P17677 238 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 ADSSP30520 456 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 CCR2P41597 374 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 EPHA5P54756 1037 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 PRKCQQ04759 706 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 MYBPC2Q14324 1141 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 TMEM132DQ14C87 1099 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 POSTNQ15063 836 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 C9orf57Q5W0N0 161 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 TANGO2Q6ICL3 276 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 OVOS1Q6IE37 1185 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 IQCEQ6IPM2 695 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 CRELD2Q6UXH1 353 aaPredicted RBP16.58■□□□□ 0.24
VTI1A-203ENST00000472892 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 PDZD4Q76G19 769 aaPredicted RBP16.58■□□□□ 0.24
VTI1A-203ENST00000472892 ELMOD1Q8N336 334 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 LEMD2Q8NC56 503 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 ELSPBP1Q96BH3 223 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 SENP8Q96LD8 212 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 IKZF4Q9H2S9 585 aa16.58■□□□□ 0.24
VTI1A-203ENST00000472892 MRPL44Q9H9J2 332 aaKnown RBP16.58■□□□□ 0.24
VTI1A-203ENST00000472892 K7ELQ4 463 aaPredicted RBP16.57■□□□□ 0.24
VTI1A-203ENST00000472892 STX6O43752 255 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 MOSPD3O75425 235 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 DCNP07585 359 aaKnown RBP16.57■□□□□ 0.24
VTI1A-203ENST00000472892 OR4Q2P0C623 313 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 FCARP24071 287 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 KCNA1Q09470 495 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 MLF2Q15773 248 aaPredicted RBP16.57■□□□□ 0.24
VTI1A-203ENST00000472892 FAM78AQ5JUQ0 283 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 ASCL5Q7RTU5 278 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 FRMD5Q7Z6J6 570 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 HS6ST3Q8IZP7 471 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 PJA1Q8NG27 643 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 PANK2Q9BZ23 570 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 FOXQ1Q9C009 403 aa16.57■□□□□ 0.24
VTI1A-203ENST00000472892 KANSL1LA0AUZ9 987 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 FRMD3A2A2Y4 597 aa16.56■□□□□ 0.24
VTI1A-203ENST00000472892 NRG2O14511 850 aaPredicted RBP16.56■□□□□ 0.24
VTI1A-203ENST00000472892 ODC1P11926 461 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms