RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 BIRC3Q13489 604 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 ZSCAN23Q3MJ62 389 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 KIAA0319Q5VV43 1072 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 KRT39Q6A163 491 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 SV2AQ7L0J3 742 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 SPATA18Q8TC71 538 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 PIK3R5Q8WYR1 880 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 TAF4BQ92750 862 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 SLC35C1Q96A29 364 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 CDCA3Q99618 268 aaPredicted RBP21.52■■□□□ 1.04
SF1-213ENST00000472725 VRTNQ9H8Y1 702 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 GDAP2Q9NXN4 497 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 DSEQ9UL01 958 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 ATG2AQ2TAZ0 1938 aa21.52■■□□□ 1.04
SF1-213ENST00000472725 SYCE3A1L190 88 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 PPEF2O14830 753 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 NCK2O43639 380 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 LILRB3O75022 631 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 N4BP1O75113 896 aaKnown RBP21.51■■□□□ 1.03
SF1-213ENST00000472725 FAM163BP0C2L3 166 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 ODC1P11926 461 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 BRCC3P46736 316 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 PTPN14Q15678 1187 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 TCERG1LQ5VWI1 586 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 TDRD10Q5VZ19 366 aaKnown RBP21.51■■□□□ 1.03
SF1-213ENST00000472725 DSTYKQ6XUX3 929 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 ANKS3Q6ZW76 656 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 DPH6Q7L8W6 267 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 TRIM59Q8IWR1 403 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 HPDLQ96IR7 371 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 EMILIN2Q9BXX0 1053 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 DNAJC25Q9H1X3 360 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 RXFP1Q9HBX9 757 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 FNIP2Q9P278 1114 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 VWA8A3KMH1 1905 aa21.51■■□□□ 1.03
SF1-213ENST00000472725 C2orf71A6NGG8 1288 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 H7C4K7 107 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 P4HA2O15460 535 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 CYP11A1P05108 521 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 TRIM49P0CI25 452 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 TRIM49CP0CI26 452 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 IRS1P35568 1242 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 MYL5Q02045 173 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 PPP3CAQ08209 521 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 NCOA4Q13772 614 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 SGSM1Q2NKQ1 1148 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 DCAF17Q5H9S7 520 aaPredicted RBP21.5■■□□□ 1.03
SF1-213ENST00000472725 C11orf57Q6ZUT1 292 aaPredicted RBP21.5■■□□□ 1.03
SF1-213ENST00000472725 TAS1R1Q7RTX1 841 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 FAXDC2Q96IV6 333 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 SENP8Q96LD8 212 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 CNOT6LQ96LI5 555 aaKnown RBP21.5■■□□□ 1.03
SF1-213ENST00000472725 MAGEC2Q9UBF1 373 aaPredicted RBP21.5■■□□□ 1.03
SF1-213ENST00000472725 NFE2L3Q9Y4A8 694 aa21.5■■□□□ 1.03
SF1-213ENST00000472725 SPTLC1O15269 473 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 CST3P01034 146 aaPredicted RBP21.49■■□□□ 1.03
SF1-213ENST00000472725 IGFBP6P24592 240 aaPredicted RBP21.49■■□□□ 1.03
SF1-213ENST00000472725 GCLMP48507 274 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 MXI1P50539 228 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 ANO6Q4KMQ2 910 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 PLPP4Q5VZY2 271 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 PPFIBP1Q86W92 1011 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 CEP57Q86XR8 500 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 IRF2BP1Q8IU81 584 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 RIN2Q8WYP3 895 aaPredicted RBP21.49■■□□□ 1.03
SF1-213ENST00000472725 IMPG2Q9BZV3 1241 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 STXBP5LQ9Y2K9 1186 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 COQ4Q9Y3A0 265 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.49■■□□□ 1.03
SF1-213ENST00000472725 BACE2Q9Y5Z0 518 aa21.49■■□□□ 1.03
SF1-213ENST00000472725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.48■■□□□ 1.03
SF1-213ENST00000472725 SMTNL1A8MU46 457 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 CYB561D2O14569 222 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 OAZ2O95190 189 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 EEF1GP26641 437 aaKnown RBP21.48■■□□□ 1.03
SF1-213ENST00000472725 TKTP29401 623 aaKnown RBP21.48■■□□□ 1.03
SF1-213ENST00000472725 CETN1Q12798 172 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 MRPL58Q14197 206 aaKnown RBP21.48■■□□□ 1.03
SF1-213ENST00000472725 RTP2Q5QGT7 225 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 TMEM86AQ8N2M4 240 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 TOP6BLQ8N6T0 577 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 CCDC150Q8NCX0 1101 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 FBXL13Q8NEE6 735 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 LNX1Q8TBB1 728 aaPredicted RBP21.48■■□□□ 1.03
SF1-213ENST00000472725 XYLT2Q9H1B5 865 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 MTRRQ9UBK8 725 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 TRANK1O15050 2925 aa21.48■■□□□ 1.03
SF1-213ENST00000472725 PRRC2BQ5JSZ5 2229 aaKnown RBP21.47■■□□□ 1.03
SF1-213ENST00000472725 I3L4J1 428 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 HUS1O60921 280 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 VNN1O95497 513 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 P4HA1P13674 534 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 PIK3CAP42336 1068 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 FMO5P49326 533 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 MYL6P60660 151 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 YWHAHQ04917 246 aaPredicted RBP21.47■■□□□ 1.03
SF1-213ENST00000472725 PSMD5Q16401 504 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 VARS2Q5ST30 1063 aaKnown RBP21.47■■□□□ 1.03
SF1-213ENST00000472725 METTL23Q86XA0 190 aa21.47■■□□□ 1.03
SF1-213ENST00000472725 TMEM130Q8N3G9 435 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms