RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 DBNDD2Q9BQY9 259 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 MRPL18Q9H0U6 180 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 PNPOQ9NVS9 261 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 CWC25Q9NXE8 425 aaPredicted RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 SLC23A1Q9UHI7 598 aa3.06□□□□□ -1.92
XRN1-210ENST00000472697 EIF2B4Q9UI10 523 aaKnown RBP3.06□□□□□ -1.92
XRN1-210ENST00000472697 HGSO14964 777 aaPredicted RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 FRS3O43559 492 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PRAMEF4O60810 478 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 DNAJB5O75953 348 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PGM3O95394 542 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ABHD16AO95870 558 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 IL18BPO95998 194 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ERBB2P04626 1255 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 APPP05067 770 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 F13BP05160 661 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 CD1AP06126 327 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ADRB2P07550 413 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 FUT4P22083 530 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 MC3RP41968 323 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 STAT5BP51692 787 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PPP5CP53041 499 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 DRG2P55039 364 aaKnown RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 RTP1P59025 263 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 YBX1P67809 324 aaKnown RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 TLE1Q04724 770 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 DBPQ10586 325 aaPredicted RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 SLC12A1Q13621 1099 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PTK2BQ14289 1009 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 BECN1Q14457 450 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 FBXO47Q5MNV8 452 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 KIAA1614Q5VZ46 1190 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 TSHZ3Q63HK5 1081 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 CNKSR3Q6P9H4 555 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 FBXO38Q6PIJ6 1188 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 TMC5Q6UXY8 1006 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 RFX8Q6ZV50 586 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 RAB11FIP4Q86YS3 637 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 NSUN7Q8NE18 718 aaKnown RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 MGARPQ8TDB4 240 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PERPQ96FX8 193 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 HERC2P3Q9BVR0 1158 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 OSBPL6Q9BZF3 934 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ANKRD2Q9GZV1 360 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 BRF2Q9HAW0 419 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 RASSF1Q9NS23 344 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 VSX1Q9NZR4 365 aaPredicted RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 MID2Q9UJV3 735 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ZMYM3Q14202 1370 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 UACAQ9BZF9 1416 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 CPS1P31327 1500 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ZNF142P52746 1687 aaPredicted RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 RICTORQ6R327 1708 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ST20-MTHFSA0A0A6YYL1 179 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 SNAP23O00161 211 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 RAB27BO00194 218 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PLOD3O60568 738 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 MLYCDO95822 493 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 RPN1P04843 607 aaKnown RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 PRKCAP17252 672 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 SDHAP31040 664 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ICAM3P32942 547 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 DDIT3P35638 169 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 GLRBP48167 497 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 CCR9P51686 369 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 NOMO3P69849 1222 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 IL13RA1P78552 427 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ATP8B2P98198 1209 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 TBCEQ15813 527 aaPredicted RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 SPATA1Q5VX52 437 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 H1FNTQ75WM6 255 aaPredicted RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 B4GALNT4Q76KP1 1039 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 KRT77Q7Z794 578 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 FAM90A1Q86YD7 464 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 RIOX2Q8IUF8 465 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 FAM20CQ8IXL6 584 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 TEX11Q8IYF3 940 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 CEP70Q8NHQ1 597 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 SLC35B2Q8TB61 432 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 TBC1D22AQ8WUA7 517 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 WFDC12Q8WWY7 111 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 BRI3BPQ8WY22 251 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 MAML3Q96JK9 1138 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 KRTAP4-9Q9BYQ8 210 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 GREM2Q9H772 168 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 WASH6PQ9NQA3 447 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PRDM8Q9NQV8 689 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 IRAK4Q9NWZ3 460 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ARHGAP20Q9P2F6 1191 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 ISY1Q9ULR0 285 aaKnown RBP3.05□□□□□ -1.92
XRN1-210ENST00000472697 CAMK2AQ9UQM7 478 aa3.05□□□□□ -1.92
XRN1-210ENST00000472697 PTPRGP23470 1445 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 ARHGEF12Q9NZN5 1544 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 MROH2AA6NES4 1674 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 SSU72P8A0A1W2PR75 194 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 ZC3H12DA2A288 527 aaKnown RBP3.04□□□□□ -1.92
XRN1-210ENST00000472697 H3BNC9 293 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 PCDH17O14917 1159 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 MED26O95402 600 aa3.04□□□□□ -1.92
XRN1-210ENST00000472697 MTHFD2P13995 350 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms