RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 ICAM1P05362 532 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 FURINP09958 794 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 STAG3L1P0CL83 205 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 ADH5P11766 374 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 LAG3P18627 525 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 SLC16A2P36021 539 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 MPLP40238 635 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 MAGEA9P43362 315 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 CCR10P46092 362 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 RPS9P46781 194 aaKnown RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 RPS26P62854 115 aaKnown RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 SIM1P81133 766 aaPredicted RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 SP2Q02086 613 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 PRKCQQ04759 706 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 TMEM62Q0P6H9 643 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 UAP1L1Q3KQV9 507 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 PCNX4Q63HM2 1172 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 TTBK2Q6IQ55 1244 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 GET4Q7L5D6 327 aaPredicted RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 ANKRD13BQ86YJ7 626 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 RPAP2Q8IXW5 612 aaPredicted RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 FAM181AQ8N9Y4 354 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 GMCL1P1Q8NEA9 526 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 GIMAP7Q8NHV1 300 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 PIP4K2CQ8TBX8 421 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 BCL7CQ8WUZ0 217 aaPredicted RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 STAG1Q8WVM7 1258 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 DNAJB3Q8WWF6 145 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 SREK1Q8WXA9 508 aaKnown RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 TBC1D5Q92609 795 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 GLG1Q92896 1179 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 SCYL1Q96KG9 808 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 SPATA33Q96N06 139 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 MYCBPQ99417 103 aaPredicted RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 ATXN3LQ9H3M9 355 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 SUDS3Q9H7L9 328 aaPredicted RBP4.98□□□□□ -1.61
LMNB1-205ENST00000472034 PIDD1Q9HB75 910 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 COL20A1Q9P218 1284 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 PADI3Q9ULW8 664 aa4.98□□□□□ -1.61
LMNB1-205ENST00000472034 CCDC195A0A1B0GUA6 201 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 TCRBV5S4A2TA0A5A2 114 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 LNP1A1A4G5 178 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 FAM221BA6H8Z2 402 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 K7ELQ4 463 aaPredicted RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 K7ESF4 209 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 CDX4O14627 284 aaPredicted RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 SRGAP3O43295 1099 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 PRDM1O75626 825 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 TIAF1O95411 115 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 DLGAP3O95886 979 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 LGALS2P05162 132 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 CELA3AP09093 270 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 PDE6AP16499 860 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ZSCAN20P17040 1043 aaPredicted RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 CSRP1P21291 193 aaKnown RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ITPKBP27987 946 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ASPAP45381 313 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 RAP1GAPP47736 663 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 PREPP48147 710 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 PXNP49023 591 aaPredicted RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 SARSP49591 514 aaKnown RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 METAP2P50579 478 aaKnown RBP eCLIP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ID3Q02535 119 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 CFHR1Q03591 330 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 TRDNQ13061 729 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 G3BP1Q13283 466 aaKnown RBP eCLIP4.97□□□□□ -1.611e-7■■■■□ 25.3
LMNB1-205ENST00000472034 MAP7Q14244 749 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 TNNI3KQ59H18 835 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ZC3H12AQ5D1E8 599 aaKnown RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 MEI1Q5TIA1 1274 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 DAB2IPQ5VWQ8 1189 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 PAOXQ6QHF9 649 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 MARCH9Q86YJ5 346 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 RELL1Q8IUW5 271 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 VPS52Q8N1B4 723 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 SLC39A11Q8N1S5 342 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 UBXN4Q92575 508 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ZNF707Q96C28 371 aaPredicted RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ZNF558Q96NG5 402 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 TAAR1Q96RJ0 339 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 NCAPGQ9BPX3 1015 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 KXD1Q9BQD3 176 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 VN1R3Q9BXE9 311 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 SEMA4CQ9C0C4 833 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ZBP1Q9H171 429 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 MED4Q9NPJ6 270 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 HEBP1Q9NRV9 189 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 SPG21Q9NZD8 308 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 DBNLQ9UJU6 430 aaKnown RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 PAXBP1Q9Y5B6 917 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 PCDHB7Q9Y5E2 793 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 FPGT-TNNI3KV9GXZ4 949 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 CSMD1Q96PZ7 3565 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 UTP20O75691 2785 aaKnown RBP4.97□□□□□ -1.61
LMNB1-205ENST00000472034 ZNF532Q9HCE3 1301 aa4.97□□□□□ -1.61
LMNB1-205ENST00000472034 BSNQ9UPA5 3926 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.96□□□□□ -1.62
LMNB1-205ENST00000472034 PATE3B3GLJ2 98 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 MBD4O95243 580 aa4.96□□□□□ -1.62
LMNB1-205ENST00000472034 IPO7O95373 1038 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms