RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 MAN1C1Q9NR34 630 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 CDYLQ9Y232 598 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 KLHL33A6NCF5 533 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 TOR1BO14657 336 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 NDUFS2O75306 463 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 C1QL1O75973 258 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 SOX10P56693 466 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 PIGFQ07326 219 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 PTPRRQ15256 657 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 FAM153CQ494X1 144 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 EPHA10Q5JZY3 1008 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 TSTD2Q5T7W7 516 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 KIAA0895LQ68EN5 471 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 TSHZ1Q6ZSZ6 1077 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 SRRM1Q8IYB3 904 aaKnown RBP4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 CNTD1Q8N815 330 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 SLC17A8Q8NDX2 589 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 SNX19Q92543 992 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 TLR10Q9BXR5 811 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 IMPG2Q9BZV3 1241 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 JKAMPQ9P055 326 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 ARPP21Q9UBL0 812 aaPredicted RBP4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 ENTPD2Q9Y5L3 495 aa4.62□□□□□ -1.67
PRPF40A-207ENST00000471701 CCDC195A0A1B0GUA6 201 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 PROM1O43490 865 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 SGTAO43765 313 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 SLC43A1O75387 559 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 SBK3P0C264 359 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 SLC6A4P31645 630 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 ANXA11P50995 505 aaKnown RBP4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 MAPK10P53779 464 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 TARDBPQ13148 414 aaKnown RBP eCLIP4.61□□□□□ -1.672e-7■■■■□ 24.5
PRPF40A-207ENST00000471701 HLXQ14774 488 aaPredicted RBP4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 RAB39AQ14964 217 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 KIAA1614Q5VZ46 1190 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 ZNF788Q6ZQV5 615 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 MICALCLQ6ZW33 695 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 PTF1AQ7RTS3 328 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 PEG10Q86TG7 708 aaKnown RBP4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 DCBLD1Q8N8Z6 715 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 B3GALNT2Q8NCR0 500 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 NSUN7Q8NE18 718 aaKnown RBP4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 JADE3Q92613 823 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 RAB24Q969Q5 203 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 CLPTM1LQ96KA5 538 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 MRFAP1Q9Y605 127 aa4.61□□□□□ -1.67
PRPF40A-207ENST00000471701 CHRM2P08172 466 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 WT1P19544 449 aaPredicted RBP4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 NXPH1P58417 271 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 ZNF280AP59817 542 aaPredicted RBP4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 FOXF2Q12947 444 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 CFAP52Q8N1V2 620 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 C1orf162Q8NEQ5 155 aaPredicted RBP4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 IFI44Q8TCB0 444 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 LPIN2Q92539 896 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 SMG7Q92540 1137 aaKnown RBP4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 FAXDC2Q96IV6 333 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 KLHL32Q96NJ5 620 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 HAPLN3Q96S86 360 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 SMOQ99835 787 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 WDR26Q9H7D7 661 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 CALCOCO1Q9P1Z2 691 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 CTTNBP2NLQ9P2B4 639 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 NR2E3Q9Y5X4 410 aa4.6□□□□□ -1.67
PRPF40A-207ENST00000471701 E7ENX8 843 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 F5H697 171 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 XPOTO43592 962 aaKnown RBP4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 SUN1O94901 812 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 ANXA1P04083 346 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 EXOSC10Q01780 885 aaKnown RBP4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 TAP2Q03519 686 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 ITIH3Q06033 890 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 IL10RAQ13651 578 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 ZNF365Q70YC5 407 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 DDX42Q86XP3 938 aaKnown RBP eCLIP4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 ADGRG5Q8IZF4 528 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 TRIB1Q96RU8 372 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 ST3GAL5Q9UNP4 418 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 WNT6Q9Y6F9 365 aa4.59□□□□□ -1.67
PRPF40A-207ENST00000471701 DNAJC9-AS1A6NH13 148 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 CCDC154A6NI56 674 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 ADM5C9JUS6 153 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 HTRA2O43464 458 aaPredicted RBP4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 TRIAP1O43715 76 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 CD1AP06126 327 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 C5AR1P21730 350 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 SMARCA1P28370 1054 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 POU6F2P78424 691 aaPredicted RBP4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 KIF23Q02241 960 aaPredicted RBP4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 SLC30A10Q6XR72 485 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 NECAB2Q7Z6G3 386 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 TTC7BQ86TV6 843 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 SH2D3CQ8N5H7 860 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 PDPRQ8NCN5 879 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 SARAFQ96BY9 339 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 MRGPRX4Q96LA9 322 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 KLC4Q9NSK0 619 aa4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 GNL3LQ9NVN8 582 aaKnown RBP4.58□□□□□ -1.68
PRPF40A-207ENST00000471701 RNF7Q9UBF6 113 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms