RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 ERN1O75460 977 aaKnown RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 HSPA1AP0DMV8 641 aaKnown RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 HSPA1BP0DMV9 641 aaKnown RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 ALOX15P16050 662 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 CCNE1P24864 410 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 RGS4P49798 205 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ARL4CP56559 192 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 PPIGQ13427 754 aaKnown RBP eCLIP9.02□□□□□ -0.97
CD47-204ENST00000471694 TBC1D1Q86TI0 1168 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 STAG2Q8N3U4 1231 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 GMCL1Q96IK5 515 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 EFHD1Q9BUP0 239 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 NMRK2Q9NPI5 230 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 UTP6Q9NYH9 597 aaKnown RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 MAD2L2Q9UI95 211 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 PREX2Q70Z35 1606 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 EMSYQ7Z589 1322 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 TSPAN3O60637 253 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ITGB3P05106 788 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 RHOCP08134 193 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 CLTAP09496 248 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ACTR2P61160 394 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ERVK-9P63128 1117 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ERVK-24P63145 666 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 SLC39A14Q15043 492 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 COBLL1Q53SF7 1204 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 HLA-DQA1Q5Y7H0 255 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 TRIM72Q6ZMU5 477 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 ZNF614Q8N883 585 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 MRFAP1L1Q96HT8 127 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 OSMRQ99650 979 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 FZD1Q9UP38 647 aa9.02□□□□□ -0.97
CD47-204ENST00000471694 EPN1Q9Y6I3 576 aaPredicted RBP9.02□□□□□ -0.97
CD47-204ENST00000471694 MYBL1P10243 752 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 GTF2E2P29084 291 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 RPS6P62753 249 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 GUCY2DQ02846 1103 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 RALGDSQ12967 914 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 TCEA2Q15560 299 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 DOK6Q6PKX4 331 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 ENOSF1Q7L5Y1 443 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 ZC3H15Q8WU90 426 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 FGFR1OP2Q9NVK5 253 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 CCDC78A2IDD5 438 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 ICAM1P05362 532 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 POLR2EP19388 210 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 INPP5BP32019 993 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 OXCT1P55809 520 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 MARSP56192 900 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 ACOX1Q15067 660 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 GRIK4Q16099 956 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 B4GALNT2Q8NHY0 566 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 ELMO2Q96JJ3 720 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 CORO1BQ9BR76 489 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 SAE1Q9UBE0 346 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 ZMYM4Q5VZL5 1548 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 LRRIQ3A6PVS8 624 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 GRAP2O75791 330 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 EYA4O95677 639 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 PRKAR2AP13861 404 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 GPC5P78333 572 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 RHOT2Q8IXI1 618 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 HDDC3Q8N4P3 179 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 CABS1Q96KC9 395 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 ZFYVE1Q9HBF4 777 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 PSD3Q9NYI0 1048 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 TULP4Q9NRJ4 1543 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 IGSF9BQ9UPX0 1349 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 PDZK1P1A8MUH7 402 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 SKAP2O75563 359 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 ZRANB2O95218 330 aaKnown RBP eCLIP9.01□□□□□ -0.97
CD47-204ENST00000471694 IL1R1P14778 569 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 CASP14P31944 242 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 CLCN3P51790 818 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 CDR2LQ86X02 465 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 JADE3Q92613 823 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 SAYSD1Q9NPB0 183 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 CPSF2Q9P2I0 782 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 TRPV2Q9Y5S1 764 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 GUCA1CO95843 209 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 HLA-DPA1P20036 260 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 GRK4P32298 578 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 DHX9Q08211 1270 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 FAM180AQ6UWF9 173 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 SUGP1Q8IWZ8 645 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 ADGRF2Q8IZF7 708 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 MAML1Q92585 1016 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 C18orf8Q96DM3 657 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 BRD9Q9H8M2 597 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 RPS6KB2Q9UBS0 482 aa9.01□□□□□ -0.97
CD47-204ENST00000471694 NDRG2Q9UN36 371 aaKnown RBP9.01□□□□□ -0.97
CD47-204ENST00000471694 KANSL1LA0AUZ9 987 aa9□□□□□ -0.97
CD47-204ENST00000471694 SUPT3HO75486 399 aa9□□□□□ -0.97
CD47-204ENST00000471694 KLRC1P26715 233 aa9□□□□□ -0.97
CD47-204ENST00000471694 PPATQ06203 517 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms