RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 PCDHA3Q9Y5H8 950 aa6.86□□□□□ -1.31
SPEN-204ENST00000471538 NFS1Q9Y697 457 aa6.86□□□□□ -1.31
SPEN-204ENST00000471538 MROH7Q68CQ1 1323 aa6.86□□□□□ -1.31
SPEN-204ENST00000471538 ANK1P16157 1881 aa6.86□□□□□ -1.31
SPEN-204ENST00000471538 LAMA3Q16787 3333 aa6.86□□□□□ -1.31
SPEN-204ENST00000471538 CCDC66A2RUB6 948 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 GOLGA6CA6NDK9 693 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 ERICH4A6NGS2 130 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 DAPK3O43293 454 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 PHF2O75151 1096 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 TOM1L1O75674 476 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 PGK2P07205 417 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 GOLGA6DP0CG33 693 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 MYBL1P10243 752 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 PYGMP11217 842 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 KRT5P13647 590 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 TNNI1P19237 187 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 ACTN2P35609 894 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 GJA5P36382 358 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 FLT3P36888 993 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 HSD17B3P37058 310 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 TNFSF9P41273 254 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 EFNA5P52803 228 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 DRG2P55039 364 aaKnown RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 BPIFB4P59827 614 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 NOMO3P69849 1222 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 SKOR1P84550 965 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 MCL1Q07820 350 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 LAMTOR4Q0VGL1 99 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 PTP4A2Q12974 167 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 PPFIA1Q13136 1202 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 PLCB4Q15147 1175 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 WDR44Q5JSH3 913 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 SPDYCQ5MJ68 293 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 CFAP58Q5T655 872 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 NAA35Q5VZE5 725 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 SCARA3Q6AZY7 606 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 TTC27Q6P3X3 843 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 FBXO46Q6PJ61 603 aaPredicted RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 ZDHHC24Q6UX98 284 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 TRIM72Q6ZMU5 477 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 SLC13A5Q86YT5 568 aaPredicted RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 WDR49Q8IV35 697 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 UBL4BQ8N7F7 174 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 C12orf50Q8NA57 414 aaPredicted RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 SHCBP1Q8NEM2 672 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 TCP11Q8WWU5 503 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 PRPF31Q8WWY3 499 aaKnown RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 MMP19Q99542 508 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 ACO2Q99798 780 aaKnown RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 TRIM51Q9BSJ1 452 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 MRPL4Q9BYD3 311 aaKnown RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 PTPRHQ9HD43 1115 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 FAM114A2Q9NRY5 505 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 ZDHHC18Q9NUE0 388 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 GOLGA6AQ9NYA3 693 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 ANKFY1Q9P2R3 1169 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 CNOT8Q9UFF9 292 aaKnown RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 PCYOX1Q9UHG3 505 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 CPSF3Q9UKF6 684 aaKnown RBP6.85□□□□□ -1.31
SPEN-204ENST00000471538 NUB1Q9Y5A7 615 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 UMODL1Q5DID0 1318 aa6.85□□□□□ -1.31
SPEN-204ENST00000471538 GOLGA6L10A0A0M3HER8 536 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 TCRBV7S2A1N4TA0A589 114 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 TMEM110-MUSTN1A8MSY1 372 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 GPR25O00155 361 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 PLXNB2O15031 1838 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 GRIN2DO15399 1336 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 MCM3APO60318 1980 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 PPFIA2O75334 1257 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 ASS1P00966 412 aaKnown RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 KRT14P02533 472 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 CFHP08603 1231 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 CAPN2P17655 700 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 OSBPP22059 807 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 RRM1P23921 792 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 TBXAS1P24557 533 aaPredicted RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 CHRNA3P32297 505 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 SLC26A2P50443 739 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 AP3M2P53677 418 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 HNRNPH2P55795 449 aaKnown RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 NOP14P78316 857 aaKnown RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 CAP1Q01518 475 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 DR1Q01658 176 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 BIRC3Q13489 604 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 TTLL12Q14166 644 aaPredicted RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 MXD4Q14582 209 aaPredicted RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 PKN2Q16513 984 aaKnown RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 KCTD19Q17RG1 926 aaPredicted RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 TMEM63BQ5T3F8 832 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 LDLRAD1Q5T700 205 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 SEL1L2Q5TEA6 688 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 LRRC31Q6UY01 552 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 TSHZ1Q6ZSZ6 1077 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 FASTKD5Q7L8L6 764 aaKnown RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 EEPD1Q7L9B9 569 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 TMC3Q7Z5M5 1100 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 TRIM50Q86XT4 487 aa6.84□□□□□ -1.31
SPEN-204ENST00000471538 PHF13Q86YI8 300 aaPredicted RBP6.84□□□□□ -1.31
SPEN-204ENST00000471538 JAMLQ86YT9 394 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms