RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 UTP14CQ5TAP6 766 aaKnown RBP4.19□□□□□ -1.74
COPS3-206ENST00000471414 VWA1Q6PCB0 445 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 RSPH3Q86UC2 560 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 TMIEQ8NEW7 156 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 LRIG1Q96JA1 1093 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 CLPTM1LQ96KA5 538 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 CASS4Q9NQ75 786 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 SLC45A2Q9UMX9 530 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 NEU2Q9Y3R4 380 aa4.19□□□□□ -1.74
COPS3-206ENST00000471414 WDR27A2RRH5 827 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 E9PLN8 166 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 XPOTO43592 962 aaKnown RBP4.18□□□□□ -1.74
COPS3-206ENST00000471414 ANXA1P04083 346 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 FOLR3P41439 243 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 MRPS35P82673 323 aaKnown RBP4.18□□□□□ -1.74
COPS3-206ENST00000471414 KIF23Q02241 960 aaPredicted RBP4.18□□□□□ -1.74
COPS3-206ENST00000471414 ITKQ08881 620 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 TCF15Q12870 199 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 BOLLQ8N9W6 283 aaKnown RBP4.18□□□□□ -1.74
COPS3-206ENST00000471414 CAGE1Q8TC20 777 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 KAT5Q92993 513 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 VKORC1Q9BQB6 163 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 SIDT1Q9NXL6 827 aaKnown RBP4.18□□□□□ -1.74
COPS3-206ENST00000471414 TLK1Q9UKI8 766 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 TNFRSF18Q9Y5U5 241 aa4.18□□□□□ -1.74
COPS3-206ENST00000471414 TRGV11A0A075B6L2 103 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 PRSS29PA6NIE9 313 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 E7ENX8 843 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 F2RL2O00254 374 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 MPPED1O15442 326 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 MATN4O95460 622 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 MALP21145 153 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 LPOP22079 712 aaPredicted RBP4.17□□□□□ -1.74
COPS3-206ENST00000471414 GATA3P23771 443 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 ANXA11P50995 505 aaKnown RBP4.17□□□□□ -1.74
COPS3-206ENST00000471414 ELLP55199 621 aaPredicted RBP4.17□□□□□ -1.74
COPS3-206ENST00000471414 RPS7P62081 194 aaKnown RBP4.17□□□□□ -1.74
COPS3-206ENST00000471414 MC2RQ01718 297 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 TAP2Q03519 686 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 KRTAP1-1Q07627 177 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 SNAPC2Q13487 334 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 DYRK1AQ13627 763 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 HLXQ14774 488 aaPredicted RBP4.17□□□□□ -1.74
COPS3-206ENST00000471414 SF3B3Q15393 1217 aaKnown RBP4.17□□□□□ -1.74
COPS3-206ENST00000471414 PPP4R3AQ6IN85 833 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.17□□□□□ -1.74
COPS3-206ENST00000471414 CLNKQ7Z7G1 428 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 TTC7BQ86TV6 843 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 PDSS2Q86YH6 399 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 CFAP52Q8N1V2 620 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 PRR18Q8N4B5 295 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 PDPRQ8NCN5 879 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 POC1BQ8TC44 478 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 ACTRT2Q8TDY3 377 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 MTMR8Q96EF0 704 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 TIMP4Q99727 224 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 DUSP26Q9BV47 211 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 PACSIN1Q9BY11 444 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 INTS13Q9NVM9 706 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 RLIMQ9NVW2 624 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 DMTF1Q9Y222 760 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 SPEF1Q9Y4P9 236 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 MRFAP1Q9Y605 127 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 PCSK5Q92824 1860 aa4.17□□□□□ -1.74
COPS3-206ENST00000471414 CCDC195A0A1B0GUA6 201 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 MASP2O00187 686 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 PROP1O75360 226 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 IGLV2-14P01704 120 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 WT1P19544 449 aaPredicted RBP4.16□□□□□ -1.74
COPS3-206ENST00000471414 CD38P28907 300 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 TMEM240Q5SV17 173 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 EFCAB2Q5VUJ9 269 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 FAM90A1Q86YD7 464 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 ADGRG5Q8IZF4 528 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 NELL1Q92832 810 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 PCDH12Q9NPG4 1184 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 CDYLQ9Y232 598 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.16□□□□□ -1.74
COPS3-206ENST00000471414 SPATA31A6Q5VVP1 1343 aa4.16□□□□□ -1.74
COPS3-206ENST00000471414 COL11A2P13942 1736 aaPredicted RBP4.15□□□□□ -1.74
COPS3-206ENST00000471414 YY2O15391 372 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 ELFN1P0C7U0 828 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 ITPKBP27987 946 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 IL12RB1P42701 662 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 MAPK10P53779 464 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 EVA1CP58658 441 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 MRPS21P82921 87 aaKnown RBP4.15□□□□□ -1.75
COPS3-206ENST00000471414 ZNF844Q08AG5 666 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 FAM50AQ14320 339 aaKnown RBP4.15□□□□□ -1.75
COPS3-206ENST00000471414 PTPRRQ15256 657 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 PTPN21Q16825 1174 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 NBPF8Q3BBV2 869 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 KHDC1Q4VXA5 237 aaKnown RBP4.15□□□□□ -1.75
COPS3-206ENST00000471414 CCDC93Q567U6 631 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 SLC4A10Q6U841 1118 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 GADL1Q6ZQY3 521 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 MICALCLQ6ZW33 695 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 LPIN2Q92539 896 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 ANKS1AQ92625 1134 aa4.15□□□□□ -1.75
COPS3-206ENST00000471414 SCAMP4Q969E2 229 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms