RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 CLNKQ7Z7G1 428 aa7.27□□□□□ -1.25
CCDC39-202ENST00000471307 HOMER2Q9NSB8 354 aa7.27□□□□□ -1.25
CCDC39-202ENST00000471307 SERPINB13Q9UIV8 391 aa7.27□□□□□ -1.25
CCDC39-202ENST00000471307 TRGV11A0A075B6L2 103 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 PRAMEF33A0A0G2JMD5 474 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 KIAA0355O15063 1070 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 PRAMEF10O60809 474 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 DTNBO60941 627 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 ARIH2O95376 493 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 SBK3P0C264 359 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 FTH1P19P0C7X4 201 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 IBSPP21815 317 aaPredicted RBP7.26□□□□□ -1.25
CCDC39-202ENST00000471307 FBLP22087 321 aaKnown RBP7.26□□□□□ -1.25
CCDC39-202ENST00000471307 FXR1P51114 621 aaKnown RBP eCLIP7.26□□□□□ -1.25
CCDC39-202ENST00000471307 PIGFQ07326 219 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 GEN1Q17RS7 908 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 TMEM240Q5SV17 173 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 PDSS2Q86YH6 399 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 CAGE1Q8TC20 777 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 GNL3LQ9NVN8 582 aaKnown RBP7.26□□□□□ -1.25
CCDC39-202ENST00000471307 RLIMQ9NVW2 624 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 KCTD5Q9NXV2 234 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 POLHQ9Y253 713 aa7.26□□□□□ -1.25
CCDC39-202ENST00000471307 SLC16A6O15403 523 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 SNUPNO95149 360 aaKnown RBP7.25□□□□□ -1.25
CCDC39-202ENST00000471307 ZFPL1O95159 310 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 ZRANB2O95218 330 aaKnown RBP eCLIP7.25□□□□□ -1.25
CCDC39-202ENST00000471307 CYP2C19P33261 490 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 CLK3P49761 638 aaKnown RBP7.25□□□□□ -1.25
CCDC39-202ENST00000471307 POU6F2P78424 691 aaPredicted RBP7.25□□□□□ -1.25
CCDC39-202ENST00000471307 DSC2Q02487 901 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 ZNF169Q14929 603 aaPredicted RBP7.25□□□□□ -1.25
CCDC39-202ENST00000471307 PTPROQ16827 1216 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 THEMIS2Q5TEJ8 643 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 ADGRG3Q86Y34 549 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 SIMC1Q8NDZ2 872 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 KAT5Q92993 513 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 AIFM2Q9BRQ8 373 aa7.25□□□□□ -1.25
CCDC39-202ENST00000471307 POLR2AP24928 1970 aaKnown RBP7.25□□□□□ -1.25
CCDC39-202ENST00000471307 E7ENX8 843 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 SRGNP10124 158 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 MALP21145 153 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 RPS7P62081 194 aaKnown RBP7.24□□□□□ -1.25
CCDC39-202ENST00000471307 TAP2Q03519 686 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 FLYWCH1Q4VC44 716 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 DPY19L2P1Q6NXN4 242 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.24□□□□□ -1.25
CCDC39-202ENST00000471307 SSH3Q8TE77 659 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 NELL1Q92832 810 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 KLHL32Q96NJ5 620 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 SMAD5Q99717 465 aaKnown RBP7.24□□□□□ -1.25
CCDC39-202ENST00000471307 TLR10Q9BXR5 811 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 INTS13Q9NVM9 706 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 LRIT1Q9P2V4 623 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 CDYLQ9Y232 598 aa7.24□□□□□ -1.25
CCDC39-202ENST00000471307 PROM1O43490 865 aa7.23□□□□□ -1.25
CCDC39-202ENST00000471307 MRPS35P82673 323 aaKnown RBP7.23□□□□□ -1.25
CCDC39-202ENST00000471307 SLC4A10Q6U841 1118 aa7.23□□□□□ -1.25
CCDC39-202ENST00000471307 C3orf20Q8ND61 904 aa7.23□□□□□ -1.25
CCDC39-202ENST00000471307 ALG13Q9NP73 1137 aaKnown RBP7.23□□□□□ -1.25
CCDC39-202ENST00000471307 CTTNBP2NLQ9P2B4 639 aa7.23□□□□□ -1.25
CCDC39-202ENST00000471307 NOP58Q9Y2X3 529 aaKnown RBP7.23□□□□□ -1.25
CCDC39-202ENST00000471307 COX11Q9Y6N1 276 aa7.23□□□□□ -1.25
CCDC39-202ENST00000471307 CCDC195A0A1B0GUA6 201 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 NT5C1B-RDH14C9J2C7 533 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 F2RL2O00254 374 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 RARRES1P49788 294 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 ANXA11P50995 505 aaKnown RBP7.22□□□□□ -1.25
CCDC39-202ENST00000471307 EXOSC10Q01780 885 aaKnown RBP7.22□□□□□ -1.25
CCDC39-202ENST00000471307 DYRK1AQ13627 763 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 HLXQ14774 488 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-202ENST00000471307 KHDC1Q4VXA5 237 aaKnown RBP7.22□□□□□ -1.25
CCDC39-202ENST00000471307 CCDC93Q567U6 631 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 CFAP52Q8N1V2 620 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 SCAMP4Q969E2 229 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 CHMP4CQ96CF2 233 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 PDLIM2Q96JY6 352 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 VRK1Q99986 396 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-202ENST00000471307 DUSP26Q9BV47 211 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 TLK1Q9UKI8 766 aa7.22□□□□□ -1.25
CCDC39-202ENST00000471307 PEX1O43933 1283 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 CHEK2O96017 543 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 GNAI3P08754 354 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 VCAM1P19320 739 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 FOLR3P41439 243 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 ELLP55199 621 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-202ENST00000471307 GNAI1P63096 354 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 SIM1P81133 766 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-202ENST00000471307 FPGSQ05932 587 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 SNAPC2Q13487 334 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 NBPF8Q3BBV2 869 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 BRDTQ58F21 947 aaPredicted RBP7.21□□□□□ -1.26
CCDC39-202ENST00000471307 KIAA0895LQ68EN5 471 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 USP45Q70EL2 814 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 PRR18Q8N4B5 295 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 CPA6Q8N4T0 437 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 PDPRQ8NCN5 879 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 TMIEQ8NEW7 156 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 ACTRT2Q8TDY3 377 aa7.21□□□□□ -1.26
CCDC39-202ENST00000471307 ZNF764Q96H86 408 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms