RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SP5Q6BEB4 398 aaPredicted RBP6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 CFAP52Q8N1V2 620 aa6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 PDPRQ8NCN5 879 aa6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 SSH3Q8TE77 659 aa6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 CAVIN3Q969G5 261 aa6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 MED15Q96RN5 788 aa6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 MTO1Q9Y2Z2 717 aaKnown RBP6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 SPEF1Q9Y4P9 236 aa6.56□□□□□ -1.36
PRPF40A-206ENST00000471167 ERN1O75460 977 aaKnown RBP6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 POU2F2P09086 479 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 AVPR1BP47901 424 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 BLOC1S1P78537 153 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 SIM1P81133 766 aaPredicted RBP6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 MPP3Q13368 585 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 ZNF169Q14929 603 aaPredicted RBP6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 TMEM240Q5SV17 173 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 KIAA0895LQ68EN5 471 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 FOXR2Q6PJQ5 311 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 FAM90A1Q86YD7 464 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 PTCD3Q96EY7 689 aaKnown RBP6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 AIFM2Q9BRQ8 373 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 C1orf43Q9BWL3 253 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 AGAP1Q9UPQ3 857 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 CDYLQ9Y232 598 aa6.55□□□□□ -1.36
PRPF40A-206ENST00000471167 ZAR1LA6NP61 321 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 ELFN1P0C7U0 828 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 KCNA2P16389 499 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 HNRNPMP52272 730 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 SF3B3Q15393 1217 aaKnown RBP6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 CD300EQ496F6 205 aaPredicted RBP6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 SLC4A10Q6U841 1118 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 GADL1Q6ZQY3 521 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 CATIPQ7Z7H3 387 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 TTC7BQ86TV6 843 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 FAM177A1Q8N128 213 aaPredicted RBP6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 SLC17A8Q8NDX2 589 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 FBXO41Q8TF61 875 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 PDLIM2Q96JY6 352 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 IMPG2Q9BZV3 1241 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 KCTD5Q9NXV2 234 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 TESQ9UGI8 421 aaKnown RBP6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 ZNHIT2Q9UHR6 403 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 PCDHA3Q9Y5H8 950 aa6.54□□□□□ -1.36
PRPF40A-206ENST00000471167 PRAMEF33A0A0G2JMD5 474 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 PRAMEF10O60809 474 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 C1QL1O75973 258 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 PRDX5P30044 214 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 TOB1P50616 345 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 CCDC93Q567U6 631 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 TSHZ1Q6ZSZ6 1077 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 USP45Q70EL2 814 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 SLC30A5Q8TAD4 765 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 LPIN2Q92539 896 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 CRAMP1Q96RY5 1269 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 PACSIN1Q9BY11 444 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 GTPBP4Q9BZE4 634 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 RIOX1Q9H6W3 641 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 TCF7L1Q9HCS4 588 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 CASS4Q9NQ75 786 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 TBCCD1Q9NVR7 557 aa6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 NOP58Q9Y2X3 529 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-206ENST00000471167 CCND1P24385 295 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 RARRES1P49788 294 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 MAP2K6P52564 334 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 HK3P52790 923 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 NOGQ13253 232 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 DYRK1AQ13627 763 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 PPP4R3AQ6IN85 833 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 KRTAP5-3Q6L8H2 238 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 VWA1Q6PCB0 445 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 MIER2Q8N344 545 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 TMEM125Q96AQ2 219 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 CHMP4CQ96CF2 233 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 ETAA1Q9NY74 926 aa6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 LUC7L2Q9Y383 392 aaKnown RBP6.52□□□□□ -1.37
PRPF40A-206ENST00000471167 ANKRD62A6NC57 917 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 VWC2LB2RUY7 222 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 MATN4O95460 622 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 SRGNP10124 158 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 CXCR5P32302 372 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 PHKA1P46020 1223 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 NEK2P51955 445 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 POU6F2P78424 691 aaPredicted RBP6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 MXRA7P84157 204 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 EXOSC10Q01780 885 aaKnown RBP6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 ATP2B3Q16720 1220 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 PPP1R3BQ86XI6 285 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 ADGRG3Q86Y34 549 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 ADGRG5Q8IZF4 528 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 ZCRB1Q8TBF4 217 aaKnown RBP6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 POC1BQ8TC44 478 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 SMOC2Q9H3U7 446 aa6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 SIDT1Q9NXL6 827 aaKnown RBP6.51□□□□□ -1.37
PRPF40A-206ENST00000471167 PROM1O43490 865 aa6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 ABLIM3O94929 683 aa6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 SNUPNO95149 360 aaKnown RBP6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 GJB1P08034 283 aa6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 BOP1Q14137 746 aaKnown RBP6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 C3orf20Q8ND61 904 aa6.5□□□□□ -1.37
PRPF40A-206ENST00000471167 HOOK2Q96ED9 719 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms