RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 MYBPHLA2RUH7 354 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 ARL5CA6NH57 179 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 SPECC1L-ADORA2AF8WAN1 911 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 ZNF263O14978 683 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 MAGEB2O15479 319 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 EPB41L2O43491 1005 aaKnown RBP6.52□□□□□ -1.37
VARS-222ENST00000470953 ZNF862O60290 1169 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 MOSPD3O75425 235 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 GJB3O75712 270 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 SKIP12755 728 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 GJA1P17302 382 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 IGFBP6P24592 240 aaPredicted RBP6.52□□□□□ -1.37
VARS-222ENST00000470953 HOXA11P31270 313 aaPredicted RBP6.52□□□□□ -1.37
VARS-222ENST00000470953 CTHP32929 405 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 PTGER3P43115 390 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 SCNN1GP51170 649 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 EXOSC10Q01780 885 aaKnown RBP6.52□□□□□ -1.37
VARS-222ENST00000470953 FAM160B1Q5W0V3 765 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 WWC2Q6AWC2 1192 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 SYT12Q8IV01 421 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 KSR1Q8IVT5 923 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 SYNPOQ8N3V7 929 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 DAGLBQ8NCG7 672 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 CCDC148Q8NFR7 591 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 LNX1Q8TBB1 728 aaPredicted RBP6.52□□□□□ -1.37
VARS-222ENST00000470953 HASPINQ8TF76 798 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 TSC1Q92574 1164 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 PGBD4Q96DM1 585 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 PGBD1Q96JS3 809 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 LRRC3BQ96PB8 259 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 GAD1Q99259 594 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 PAAF1Q9BRP4 392 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 SLC26A6Q9BXS9 759 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 TPSD1Q9BZJ3 242 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 SNTG2Q9NY99 539 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 GTSE1Q9NYZ3 720 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 KANSL3Q9P2N6 904 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 PCOLCE2Q9UKZ9 415 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 BRPF3Q9ULD4 1205 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 HES2Q9Y543 173 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 AK5Q9Y6K8 562 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 HELZP42694 1942 aaKnown RBP6.52□□□□□ -1.37
VARS-222ENST00000470953 KNTC1P50748 2209 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 NBASA2RRP1 2371 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 CDKL5O76039 1030 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 POU2F2P09086 479 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 TMOD1P28289 359 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 MLH1P40692 756 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 RAB27AP51159 221 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 KPNA1P52294 538 aaPredicted RBP6.51□□□□□ -1.37
VARS-222ENST00000470953 STK3Q13188 491 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 SMAD1Q15797 465 aaKnown RBP6.51□□□□□ -1.37
VARS-222ENST00000470953 IGFBP7Q16270 282 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 MIS18BP1Q6P0N0 1132 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 RUFY3Q7L099 469 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 CEP57Q86XR8 500 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 MFSD6LQ8IWD5 586 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 REXO1Q8N1G1 1221 aaKnown RBP6.51□□□□□ -1.37
VARS-222ENST00000470953 GSTCDQ8NEC7 633 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 BICD2Q8TD16 824 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 TMEM176AQ96HP8 235 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 NAF1Q96HR8 494 aaKnown RBP6.51□□□□□ -1.37
VARS-222ENST00000470953 ZFYVE19Q96K21 471 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 CORO1BQ9BR76 489 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 SH2D3AQ9BRG2 576 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 ANO3Q9BYT9 981 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 GCOM2Q9BZD3 368 aaPredicted RBP6.51□□□□□ -1.37
VARS-222ENST00000470953 C6orf50Q9HD87 102 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 PDRG1Q9NUG6 133 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 GABBR1Q9UBS5 961 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 ADAM28Q9UKQ2 775 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 SLC6A14Q9UN76 642 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 GTF3C3Q9Y5Q9 886 aa6.51□□□□□ -1.37
VARS-222ENST00000470953 V9GY48 417 aaPredicted RBP6.51□□□□□ -1.37
VARS-222ENST00000470953 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 TMEM150BA6NC51 233 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 SMCO2A6NFE2 343 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 HEPACAM2A8MVW5 462 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 BHMG1C9JSJ3 638 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 MEIS1O00470 390 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 LUC7L3O95232 432 aaKnown RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 FOSP01100 380 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 HOXB4P17483 251 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 SFPQP23246 707 aaKnown RBP eCLIP6.5□□□□□ -1.37
VARS-222ENST00000470953 COL8A1P27658 744 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 GNA11P29992 359 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 OR1D2P34982 312 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 DGKEP52429 567 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 MLLT6P55198 1093 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 CLDN6P56747 220 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 CCT2P78371 535 aaKnown RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 GFPT1Q06210 699 aaPredicted RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 TNK2Q07912 1038 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 SSRP1Q08945 709 aaKnown RBP6.5□□□□□ -1.37
VARS-222ENST00000470953 MYO1EQ12965 1108 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 SLC14A1Q13336 389 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 AP3B2Q13367 1082 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 RAB33AQ14088 237 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 ANKRD1Q15327 319 aa6.5□□□□□ -1.37
VARS-222ENST00000470953 PSMD5Q16401 504 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms