RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 HSPBP1Q9NZL4 362 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 CGNQ9P2M7 1197 aaKnown RBP15.31■□□□□ 0.04
TOP3B-215ENST00000470338 FBXL5Q9UKA1 691 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 CIZ1Q9ULV3 898 aaPredicted RBP15.31■□□□□ 0.04
TOP3B-215ENST00000470338 NR2E1Q9Y466 385 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 NOTCH4Q99466 2003 aa15.31■□□□□ 0.04
TOP3B-215ENST00000470338 ZNF233A6NK53 670 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 SPTLC1O15269 473 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 PRR29P0C7W0 189 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 ALADP13716 330 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 TYMPP19971 482 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 ROR1Q01973 937 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 DSTYKQ6XUX3 929 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 CBWD2Q8IUF1 395 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 C12orf56Q8IXR9 622 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 FMR1NBQ8N0W7 255 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-215ENST00000470338 CACTINQ8WUQ7 758 aaKnown RBP15.3■□□□□ 0.04
TOP3B-215ENST00000470338 SMG7Q92540 1137 aaKnown RBP15.3■□□□□ 0.04
TOP3B-215ENST00000470338 SENP8Q96LD8 212 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 OXCT2Q9BYC2 517 aaPredicted RBP15.3■□□□□ 0.04
TOP3B-215ENST00000470338 PDE11AQ9HCR9 933 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 USTQ9Y2C2 406 aa15.3■□□□□ 0.04
TOP3B-215ENST00000470338 WDR27A2RRH5 827 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 GOLGA6L4A6NEF3 574 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 CLIC2O15247 247 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 DCXO43602 365 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 RHOBTB3O94955 611 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 HNRNPA1P09651 372 aaKnown RBP eCLIP15.29■□□□□ 0.04
TOP3B-215ENST00000470338 HOXA9P31269 272 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 TFAMQ00059 246 aaKnown RBP15.29■□□□□ 0.04
TOP3B-215ENST00000470338 YWHAHQ04917 246 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-215ENST00000470338 SNW1Q13573 536 aaKnown RBP15.29■□□□□ 0.04
TOP3B-215ENST00000470338 SURF1Q15526 300 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 CTXN3Q4LDR2 81 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 ZNF280DQ6N043 979 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 HS2ST1Q7LGA3 356 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 ENGASEQ8NFI3 743 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 CXorf38Q8TB03 319 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 TMEM174Q8WUU8 243 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 BORCS6Q96GS4 357 aa15.29■□□□□ 0.04
TOP3B-215ENST00000470338 WDR6Q9NNW5 1121 aaKnown RBP15.29■□□□□ 0.04
TOP3B-215ENST00000470338 TIMM13Q9Y5L4 95 aaPredicted RBP15.29■□□□□ 0.04
TOP3B-215ENST00000470338 C2CD4DB7Z1M9 353 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 CYP11A1P05108 521 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 C8AP07357 584 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 POU2F2P09086 479 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 ATF2P15336 505 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 TAF6P49848 677 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 KCNB1Q14721 858 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 SNRNP35Q16560 246 aaKnown RBP15.28■□□□□ 0.04
TOP3B-215ENST00000470338 PPM1LQ5SGD2 360 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 LIN9Q5TKA1 542 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 TPGS2Q68CL5 300 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 CCDC149Q6ZUS6 474 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 ZDHHC14Q8IZN3 488 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 C1orf127Q8N9H9 656 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 XXYLT1Q8NBI6 393 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 GOLGA5Q8TBA6 731 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 SLC7A14Q8TBB6 771 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 NOC3LQ8WTT2 800 aaKnown RBP15.28■□□□□ 0.04
TOP3B-215ENST00000470338 C1QTNF1Q9BXJ1 281 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 KCTD10Q9H3F6 313 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 TSHZ2Q9NRE2 1034 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 INTS13Q9NVM9 706 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 MUTYHQ9UIF7 546 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
TOP3B-215ENST00000470338 ARHGEF37A1IGU5 675 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 PDXKO00764 312 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 ODC1P11926 461 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 SP100P23497 879 aaPredicted RBP15.27■□□□□ 0.04
TOP3B-215ENST00000470338 PNPLA4P41247 253 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 CYP2J2P51589 502 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 SCARA3Q6AZY7 606 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 OVOS1Q6IE37 1185 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 OTOP3Q7RTS5 596 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 USP37Q86T82 979 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 TCEAL8Q8IYN2 117 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 PLCD3Q8N3E9 789 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 RDH13Q8NBN7 331 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 CCDC47Q96A33 483 aaKnown RBP15.27■□□□□ 0.04
TOP3B-215ENST00000470338 CCDC34Q96HJ3 373 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 PIDD1Q9HB75 910 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 DMAC2Q9NW81 257 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 ITGA11Q9UKX5 1188 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 DSEQ9UL01 958 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 AGAP1Q9UPQ3 857 aa15.27■□□□□ 0.04
TOP3B-215ENST00000470338 CLUHO75153 1309 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 PTPRJQ12913 1337 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 OR6C75A6NL08 312 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 KPNA7A9QM74 516 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 CYB561D2O14569 222 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 GPR37L1O60883 481 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 N4BP1O75113 896 aaKnown RBP15.26■□□□□ 0.03
TOP3B-215ENST00000470338 SEC24AO95486 1093 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 ITGB3P05106 788 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 POLR2BP30876 1174 aaKnown RBP15.26■□□□□ 0.03
TOP3B-215ENST00000470338 ELF1P32519 619 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 ARPP19P56211 112 aa15.26■□□□□ 0.03
TOP3B-215ENST00000470338 FAM160A1Q05DH4 1040 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms