RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 PAX3P23760 479 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 ATICP31939 592 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 PNPLA4P41247 253 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 PIK3CAP42336 1068 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 ERVFC1P60507 584 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 MYL7Q01449 175 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 ELAVL2Q12926 359 aaKnown RBP11.36□□□□□ -0.59
SMC1A-206ENST00000470241 SV2CQ496J9 727 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 VWA3BQ502W6 1294 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 MIIPQ5JXC2 388 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 RTP2Q5QGT7 225 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 FAM171A1Q5VUB5 890 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 VPS52Q8N1B4 723 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 ELMO3Q96BJ8 720 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 B3GALT6Q96L58 329 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 SENP8Q96LD8 212 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 FAM161BQ96MY7 647 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 TUBGCP2Q9BSJ2 902 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 LMAN2LQ9H0V9 348 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 ZBP1Q9H171 429 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 PRDM12Q9H4Q4 367 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 VRTNQ9H8Y1 702 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 CHST7Q9NS84 486 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 RAB20Q9NX57 234 aa11.36□□□□□ -0.59
SMC1A-206ENST00000470241 LIMA1Q9UHB6 759 aaKnown RBP11.36□□□□□ -0.59
SMC1A-206ENST00000470241 PUF60Q9UHX1 559 aaKnown RBP11.36□□□□□ -0.59
SMC1A-206ENST00000470241 KIAA1671Q9BY89 1806 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 LRRC10BA6NIK2 292 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 CYB561D2O14569 222 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 FSCN2O14926 492 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 SYN3O14994 580 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 P4HA2O15460 535 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 TRAPPC3O43617 180 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 LILRB3O75022 631 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 ASS1P00966 412 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 CTSAP10619 480 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 CDK11BP21127 795 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 TKTP29401 623 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 IRS1P35568 1242 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 COPB1P53618 953 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 DSG1Q02413 1049 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 MYO1EQ12965 1108 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 SGSM1Q2NKQ1 1148 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 USP41Q3LFD5 358 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 KIAA0319Q5VV43 1072 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 SPOPLQ6IQ16 392 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 DSTYKQ6XUX3 929 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 Q7L0L9 218 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 GAS2L3Q86XJ1 694 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 RNF214Q8ND24 703 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 FBXL13Q8NEE6 735 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 LMO3Q8TAP4 145 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 AUTS2Q8WXX7 1259 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 TCF25Q9BQ70 676 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 PI4K2AQ9BTU6 479 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 NDST4Q9H3R1 872 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 APOBEC3GQ9HC16 384 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 GDAP2Q9NXN4 497 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 STK39Q9UEW8 545 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 R3HCC1Q9Y3T6 440 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 PCDHGC5Q9Y5F6 944 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 SNX9Q9Y5X1 595 aa11.35□□□□□ -0.59
SMC1A-206ENST00000470241 PDCD11Q14690 1871 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 TDRD15B5MCY1 1934 aaKnown RBP11.35□□□□□ -0.59
SMC1A-206ENST00000470241 TRIP11Q15643 1979 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 GOLGA6L19H0YKK7 550 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 CSPG5O95196 566 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 TYMPP19971 482 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 ADGRE1Q14246 886 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 PTPN14Q15678 1187 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 ZNF699Q32M78 642 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 WDR72Q3MJ13 1102 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 LIMS2Q7Z4I7 341 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 CEP57Q86XR8 500 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 TAF4BQ92750 862 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 TTPALQ9BTX7 342 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 VPS16Q9H269 839 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 TLR9Q9NR96 1032 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 NXF1Q9UBU9 619 aaKnown RBP11.34□□□□□ -0.59
SMC1A-206ENST00000470241 POLIQ9UNA4 740 aa11.34□□□□□ -0.59
SMC1A-206ENST00000470241 TIMM13Q9Y5L4 95 aaPredicted RBP11.34□□□□□ -0.59
SMC1A-206ENST00000470241 GTPBP10A4D1E9 387 aaKnown RBP11.33□□□□□ -0.6
SMC1A-206ENST00000470241 HIDE1A8MVS5 230 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 CXCL14O95715 111 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 CYP11A1P05108 521 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 URODP06132 367 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 ODC1P11926 461 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 ASPAP45381 313 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 GLUD2P49448 558 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 NOP14P78316 857 aaKnown RBP11.33□□□□□ -0.6
SMC1A-206ENST00000470241 MRPL58Q14197 206 aaKnown RBP11.33□□□□□ -0.6
SMC1A-206ENST00000470241 PTPROQ16827 1216 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 ZNF667Q5HYK9 610 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 VARS2Q5ST30 1063 aaKnown RBP11.33□□□□□ -0.6
SMC1A-206ENST00000470241 PLPP4Q5VZY2 271 aa11.33□□□□□ -0.6
SMC1A-206ENST00000470241 WSCD1Q658N2 575 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms