RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 TPM4P67936 248 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 DLG4P78352 724 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 NCOA4Q13772 614 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 ANO6Q4KMQ2 910 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 C1orf220Q5T0J3 134 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 TCERG1LQ5VWI1 586 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 DSTYKQ6XUX3 929 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 PPFIBP1Q86W92 1011 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 TMEM173Q86WV6 379 aaPredicted RBP13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 METTL23Q86XA0 190 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 TTC39CQ8N584 583 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 TOP6BLQ8N6T0 577 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 PIK3R5Q8WYR1 880 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 CDX2Q99626 313 aaPredicted RBP13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 TCF25Q9BQ70 676 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 EMILIN2Q9BXX0 1053 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 GPR62Q9BZJ7 368 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 DNAI2Q9GZS0 605 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 ZBP1Q9H171 429 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 DNAJC25Q9H1X3 360 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 RXFP1Q9HBX9 757 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 FNIP2Q9P278 1114 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 DPP7Q9UHL4 492 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 MAFFQ9ULX9 164 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 BACE2Q9Y5Z0 518 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 PTPRJQ12913 1337 aa13.59□□□□□ -0.23
SPTLC1-204ENST00000469778 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.23
SPTLC1-204ENST00000469778 LRRC10BA6NIK2 292 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 BECN2A8MW95 431 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 LILRB3O75022 631 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 AFPP02771 609 aaKnown RBP13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 GCLMP48507 274 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 MXI1P50539 228 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 PPP3CAQ08209 521 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 CAMK1Q14012 370 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 DCAF17Q5H9S7 520 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 CDKAL1Q5VV42 579 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 TDRD10Q5VZ19 366 aaKnown RBP13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 IRF2BP1Q8IU81 584 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 C3orf58Q8NDZ4 430 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 FBXL13Q8NEE6 735 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 BCL7CQ8WUZ0 217 aaPredicted RBP13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 SENP8Q96LD8 212 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 CNOT6LQ96LI5 555 aaKnown RBP13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 NSUN3Q9H649 340 aaKnown RBP13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 ENTPD7Q9NQZ7 604 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 MTCH2Q9Y6C9 303 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 TRIP11Q15643 1979 aa13.58□□□□□ -0.24
SPTLC1-204ENST00000469778 C2orf71A6NGG8 1288 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 EPOPA6NHQ4 379 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 OR6C75A6NL08 312 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 CYB561D2O14569 222 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 ASS1P00966 412 aaKnown RBP13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 CST3P01034 146 aaPredicted RBP13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 TRIM49P0CI25 452 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 TRIM49CP0CI26 452 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 DNAJB1P25685 340 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 MTIF2P46199 727 aaKnown RBP13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 LHX1P48742 406 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 FMO5P49326 533 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 GUCY2FP51841 1108 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 ZNF445P59923 1031 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 ERVFC1P60507 584 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 YWHAHQ04917 246 aaPredicted RBP13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 KCNH2Q12809 1159 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 MRPL58Q14197 206 aaKnown RBP13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 MAN2A1Q16706 1144 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 WDR72Q3MJ13 1102 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 TCP11X2Q5H9J9 407 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 ZNF667Q5HYK9 610 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 ELMSAN1Q6PJG2 1045 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 C11orf57Q6ZUT1 292 aaPredicted RBP13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 RTL10Q7L3V2 364 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 LIMS2Q7Z4I7 341 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 SPRED2Q7Z698 418 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 THEM5Q8N1Q8 247 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 GDPD5Q8WTR4 605 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 RABGGTAQ92696 567 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 FAM81BQ96LP2 452 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 TUBGCP2Q9BSJ2 902 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 VN1R3Q9BXE9 311 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 XYLT2Q9H1B5 865 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 FANCLQ9NW38 375 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 RAB20Q9NX57 234 aa13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 PDCD11Q14690 1871 aaKnown RBP13.57□□□□□ -0.24
SPTLC1-204ENST00000469778 KCNJ18B7U540 433 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 TACC1O75410 805 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 ADH1AP07327 375 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 SRGAP2BP0DMP2 458 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 TRIM21P19474 475 aaKnown RBP13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 CDK11BP21127 795 aaKnown RBP13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 PIK3CAP42336 1068 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 NDUFV1P49821 464 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 MYL6P60660 151 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 TNNC1P63316 161 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
SPTLC1-204ENST00000469778 KCNJ12Q14500 433 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms