RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 CLLU1OSQ5K130 101 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 COL13A1Q5TAT6 717 aaPredicted RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 LMBRD2Q68DH5 695 aaPredicted RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 IQCEQ6IPM2 695 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 PDXDC1Q6P996 788 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 WDR59Q6PJI9 974 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 NUDT18Q6ZVK8 323 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 C16orf59Q7L2K0 433 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 CCDC186Q7Z3E2 898 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 NPAS4Q8IUM7 802 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 RPUSD2Q8IZ73 545 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 BEST2Q8NFU1 509 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 OR8K1Q8NGG5 319 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 FAM84AQ96KN4 292 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 NT5C1BQ96P26 610 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 GAD1Q99259 594 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 SYT11Q9BT88 431 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 BCO2Q9BYV7 579 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 RC3H2Q9HBD1 1191 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 IL23AQ9NPF7 189 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 FAM207AQ9NSI2 230 aaPredicted RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 GDAP2Q9NXN4 497 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 DPP3Q9NY33 737 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 LUC7L2Q9Y383 392 aaKnown RBP8.78□□□□□ -1
NPHP3-204ENST00000469232 FHOD1Q9Y613 1164 aa8.78□□□□□ -1
NPHP3-204ENST00000469232 RBAK-RBAKDNI3L0D1 243 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 HOXA2O43364 376 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 TRIM21P19474 475 aaKnown RBP8.77□□□□□ -1.01
NPHP3-204ENST00000469232 KRT9P35527 623 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 DEKP35659 375 aaKnown RBP8.77□□□□□ -1.01
NPHP3-204ENST00000469232 MLH1P40692 756 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 KCNJ6P48051 423 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF132P52740 706 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 POLR2FP61218 127 aaKnown RBP8.77□□□□□ -1.01
NPHP3-204ENST00000469232 NOP14P78316 857 aaKnown RBP8.77□□□□□ -1.01
NPHP3-204ENST00000469232 CCZ1BP86790 482 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 CCZ1P86791 482 aaPredicted RBP8.77□□□□□ -1.01
NPHP3-204ENST00000469232 APBA1Q02410 837 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 C9orf57Q5W0N0 161 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 E4F1Q66K89 784 aaPredicted RBP8.77□□□□□ -1.01
NPHP3-204ENST00000469232 HGSNATQ68CP4 663 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 CD300LGQ6UXG3 332 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 IRF2BP2Q7Z5L9 587 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 PPFIBP1Q86W92 1011 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 FMNL3Q8IVF7 1028 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 ARHGEF19Q8IW93 802 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 LRRC8AQ8IWT6 810 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 FAM71AQ8IYT1 594 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 TMEM199Q8N511 208 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 SPC24Q8NBT2 197 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 OLIG1Q8TAK6 271 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 LPPQ93052 612 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 C18orf25Q96B23 403 aaPredicted RBP8.77□□□□□ -1.01
NPHP3-204ENST00000469232 ZFP42Q96MM3 310 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 CASD1Q96PB1 797 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 ABHD10Q9NUJ1 306 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 KANSL3Q9P2N6 904 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 TUBGCP4Q9UGJ1 667 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 PARP2Q9UGN5 583 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 NUB1Q9Y5A7 615 aa8.77□□□□□ -1.01
NPHP3-204ENST00000469232 F8VZ95 297 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 TMEM189-UBE2V1I3L0A0 370 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 THP07101 528 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 CSF2RAP15509 400 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 RAG1P15918 1043 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 TBXAS1P24557 533 aaPredicted RBP8.76□□□□□ -1.01
NPHP3-204ENST00000469232 PNPLA4P41247 253 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 PIK3CAP42336 1068 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 MYL6P60660 151 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 PPIGQ13427 754 aaKnown RBP eCLIP8.76□□□□□ -1.016e-8■■■■■ 29.3
NPHP3-204ENST00000469232 BIRC3Q13489 604 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 CUL2Q13617 745 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 IKBKEQ14164 716 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 RASIP1Q5U651 963 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 CCDC112Q8NEF3 446 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF397Q8NF99 534 aaPredicted RBP8.76□□□□□ -1.01
NPHP3-204ENST00000469232 SPATA18Q8TC71 538 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 TOP1MTQ969P6 601 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 ZNF689Q96CS4 500 aaPredicted RBP8.76□□□□□ -1.01
NPHP3-204ENST00000469232 UROC1Q96N76 676 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 HTATIP2Q9BUP3 242 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 NIF3L1Q9GZT8 377 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 KCNF1Q9H3M0 494 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 CYP3A43Q9HB55 503 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 KLK14Q9P0G3 267 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 DNAJC12Q9UKB3 198 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 EFEMP2O95967 443 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 ITGB3P05106 788 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 TPM1P09493 284 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 ANXA13P27216 316 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 POLR2BP30876 1174 aaKnown RBP8.76□□□□□ -1.01
NPHP3-204ENST00000469232 SOX5P35711 763 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 ASPAP45381 313 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 SCNN1GP51170 649 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 GUCY2FP51841 1108 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 ADKP55263 362 aaKnown RBP8.76□□□□□ -1.01
NPHP3-204ENST00000469232 INCA1Q0VD86 236 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 TUSC3Q13454 348 aa8.76□□□□□ -1.01
NPHP3-204ENST00000469232 DRAP1Q14919 205 aaPredicted RBP8.76□□□□□ -1.01
NPHP3-204ENST00000469232 UPP1Q16831 310 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms