RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SYT2Q8N9I0 419 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 LEMD2Q8NC56 503 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 ZSCAN18Q8TBC5 510 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 FAM3CQ92520 227 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 PNMA5Q96PV4 448 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 KIF2CQ99661 725 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 LRRC3Q9BY71 257 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 FAM126AQ9BYI3 521 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 HAPLN2Q9GZV7 340 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 CHRDQ9H2X0 955 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 LMAN1LQ9HAT1 526 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 TRPV4Q9HBA0 871 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 SH2B1Q9NRF2 756 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 ANKFY1Q9P2R3 1169 aa13.36□□□□□ -0.27
COL5A1-207ENST00000469093 TIMM13Q9Y5L4 95 aaPredicted RBP13.36□□□□□ -0.27
COL5A1-207ENST00000469093 TTC26A0AVF1 554 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 VNN2O95498 520 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 CXCL8P10145 99 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 CPB1P15086 417 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 TGM1P22735 817 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 LRPAP1P30533 357 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 TEAD2Q15562 447 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 HYIQ5T013 277 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 MFSD6LQ8IWD5 586 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 DEPDC1BQ8WUY9 529 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 PLIN2Q99541 437 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 CRISPLD1Q9H336 500 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 ASAH2Q9NR71 780 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 SMG5Q9UPR3 1016 aaKnown RBP13.35□□□□□ -0.27
COL5A1-207ENST00000469093 PIAS3Q9Y6X2 628 aa13.35□□□□□ -0.27
COL5A1-207ENST00000469093 CITO14578 2027 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 FRYLO94915 3013 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 NPHP3-ACAD11A0A0J9YXS1 232 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 HEPACAM2A8MVW5 462 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 ARNTLO00327 626 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 ZNF263O14978 683 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 CLTAP09496 248 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 OR4Q2P0C623 313 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 CHRNB1P11230 501 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 CYP3A5P20815 502 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 AARSP49588 968 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL5A1-207ENST00000469093 SLC12A3P55017 1021 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 MLLT6P55198 1093 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-207ENST00000469093 YWHAHQ04917 246 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-207ENST00000469093 DUSP4Q13115 394 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 GPR17Q13304 367 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 KCTD17Q8N5Z5 321 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 SHKBP1Q8TBC3 707 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 SECISBP2LQ93073 1101 aaKnown RBP13.34□□□□□ -0.27
COL5A1-207ENST00000469093 RSPRY1Q96DX4 576 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 KIF12Q96FN5 646 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 PGLYRP2Q96PD5 576 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-207ENST00000469093 GPR88Q9GZN0 384 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 DNAJC25Q9H1X3 360 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 YIPF1Q9Y548 306 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 NCANO14594 1321 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 PATJQ8NI35 1801 aa13.34□□□□□ -0.27
COL5A1-207ENST00000469093 LACTBL1A8MY62 500 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 PLA2G4BP0C869 781 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 SDHBP21912 280 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 CCNE1P24864 410 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 TNFSF9P41273 254 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 ATXN1P54253 815 aaKnown RBP13.33□□□□□ -0.28
COL5A1-207ENST00000469093 NRLP54845 237 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 ATP2C1P98194 919 aaPredicted RBP13.33□□□□□ -0.28
COL5A1-207ENST00000469093 GAS6Q14393 721 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 ARSHQ5FYA8 562 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 CENPPQ6IPU0 288 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 TMC8Q8IU68 726 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 KCNN1Q92952 543 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 E2F7Q96AV8 911 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 UBQLN1Q9UMX0 589 aaKnown RBP13.33□□□□□ -0.28
COL5A1-207ENST00000469093 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
COL5A1-207ENST00000469093 A0A1W2PRU2 124 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 OR6C75A6NL08 312 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 PRR5-ARHGAP8B1AHC4 643 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 FAM189A1O60320 539 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 ADRB2P07550 413 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 MATR3P43243 847 aaKnown RBP eCLIP13.32□□□□□ -0.28
COL5A1-207ENST00000469093 CXCL12P48061 93 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 CCR3P51677 355 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 GUCY2FP51841 1108 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 EPHB3P54753 998 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 NCKAP1LP55160 1127 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 ARHGAP8P85298 464 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 CACNB1Q02641 598 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-207ENST00000469093 LMNB2Q03252 620 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 RILPL1Q5EBL4 403 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 DSTYKQ6XUX3 929 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 HAUS6Q7Z4H7 955 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 DNAJB7Q7Z6W7 309 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-207ENST00000469093 USP37Q86T82 979 aa13.32□□□□□ -0.28
COL5A1-207ENST00000469093 ARID3BQ8IVW6 561 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-207ENST00000469093 CELF5Q8N6W0 485 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms