RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 FAM81BQ96LP2 452 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 ZNF558Q96NG5 402 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 CASD1Q96PB1 797 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 MMS19Q96T76 1030 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 CDX2Q99626 313 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-216ENST00000468949 RAD9AQ99638 391 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 TMEM175Q9BSA9 504 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 COLEC11Q9BWP8 271 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.73□□□□□ -1.011e-15■■■■■ 67.3
HDAC6-216ENST00000468949 FAM207AQ9NSI2 230 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-216ENST00000468949 PLAGL2Q9UPG8 496 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 PRG3Q9Y2Y8 225 aaPredicted RBP8.73□□□□□ -1.01
HDAC6-216ENST00000468949 RWDD3Q9Y3V2 267 aa8.73□□□□□ -1.01
HDAC6-216ENST00000468949 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.73□□□□□ -1.018e-7■■■□□ 18.4
HDAC6-216ENST00000468949 A0A1W2PQC6 194 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 FSD2A1L4K1 749 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 C2orf72A6NCS6 295 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 LRRC10BA6NIK2 292 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 PMM2O15305 246 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 HUS1O60921 280 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 TADA2AO75478 443 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ADCY5O95622 1261 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 C4BPAP04003 597 aaKnown RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ALDH2P05091 517 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 CA3P07451 260 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ODC1P11926 461 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 TBXAS1P24557 533 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 LRPAP1P30533 357 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 CLCNKBP51801 687 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ZNF75DP51815 510 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 AFF1P51825 1210 aaKnown RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 MFAP3P55082 362 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 MYL6P60660 151 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 LRMPQ12912 555 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ELAVL2Q12926 359 aaKnown RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 CAMK2BQ13554 666 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 RAPGEF1Q13905 1077 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 TSR1Q2NL82 804 aaKnown RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 WDR72Q3MJ13 1102 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 EPC2Q52LR7 807 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 C1orf220Q5T0J3 134 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 SPECC1LQ69YQ0 1117 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 TRIM65Q6PJ69 517 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 TMC6Q7Z403 805 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 FMNL3Q8IVF7 1028 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ZNF397Q8NF99 534 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 MAFAQ8NHW3 353 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 HASPINQ8TF76 798 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ZNF516Q92618 1163 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 TMEM169Q96HH4 297 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 FAM84AQ96KN4 292 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 NAP1L5Q96NT1 182 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 SPAG5Q96R06 1193 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 ERGIC2Q96RQ1 377 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 GAS2L1Q99501 681 aaPredicted RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 PI4K2AQ9BTU6 479 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 NUP58Q9BVL2 599 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 NIF3L1Q9GZT8 377 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 NXF1Q9UBU9 619 aaKnown RBP8.72□□□□□ -1.01
HDAC6-216ENST00000468949 FAN1Q9Y2M0 1017 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 DAAM1Q9Y4D1 1078 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 PCDHB12Q9Y5F1 795 aa8.72□□□□□ -1.01
HDAC6-216ENST00000468949 SF3B1O75533 1304 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■■■ 66.8
HDAC6-216ENST00000468949 CITO14578 2027 aa8.71□□□□□ -1.01
HDAC6-216ENST00000468949 KPNA7A9QM74 516 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 MEFVO15553 781 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-216ENST00000468949 TEX33O43247 280 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 DDHD2O94830 711 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 KIF4AO95239 1232 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 PTMAP06454 111 aaKnown RBP8.71□□□□□ -1.02
HDAC6-216ENST00000468949 MYOGP15173 224 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 CA8P35219 290 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 CTNNB1P35222 781 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 BCAR1P56945 870 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 SOX4Q06945 474 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-216ENST00000468949 DSC1Q08554 894 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 BMS1Q14692 1282 aaKnown RBP8.71□□□□□ -1.02
HDAC6-216ENST00000468949 GRIN2CQ14957 1233 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 NR1I3Q14994 352 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ZBTB6Q15916 424 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 DCLRE1AQ6PJP8 1040 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 C15orf39Q6ZRI6 1047 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ENOSF1Q7L5Y1 443 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-216ENST00000468949 METTL23Q86XA0 190 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ZNF280BQ86YH2 543 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 COLGALT2Q8IYK4 626 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 EHBP1Q8NDI1 1231 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 GSTCDQ8NEC7 633 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 APPL2Q8NEU8 664 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ZNF689Q96CS4 500 aaPredicted RBP8.71□□□□□ -1.02
HDAC6-216ENST00000468949 CXCL16Q9H2A7 254 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 PRDM12Q9H4Q4 367 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 NRDE2Q9H7Z3 1164 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 MIOSQ9NXC5 875 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 APEX2Q9UBZ4 518 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 STK39Q9UEW8 545 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 SIX4Q9UIU6 781 aa8.71□□□□□ -1.02
HDAC6-216ENST00000468949 ADAM28Q9UKQ2 775 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms