RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 ZNF280BQ86YH2 543 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 TMEM139Q8IV31 216 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 ABI1Q8IZP0 508 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 TNS4Q8IZW8 715 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 DPF3Q92784 378 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 TOP1MTQ969P6 601 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 ZNF830Q96NB3 372 aaPredicted RBP18.79■□□□□ 0.6
RPL39-202ENST00000468844 CASD1Q96PB1 797 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 MYO6Q9UM54 1294 aa18.79■□□□□ 0.6
RPL39-202ENST00000468844 EFCAB14O75071 495 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 IGFBP6P24592 240 aaPredicted RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 HNRNPH3P31942 346 aaKnown RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 MFAP3P55082 362 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 MYO1EQ12965 1108 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 UPP1Q16831 310 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 ZNF365Q70YC5 407 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 TMCO2Q7Z6W1 182 aaPredicted RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 C3orf58Q8NDZ4 430 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 URGCPQ8TCY9 931 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 SHC3Q92529 594 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 NXF1Q9UBU9 619 aaKnown RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 POLIQ9UNA4 740 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 FOXN3O00409 490 aaPredicted RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 HOXA2O43364 376 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 DDHD2O94830 711 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 TBXAS1P24557 533 aaPredicted RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 DSC1Q08554 894 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 SCARA5Q6ZMJ2 495 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 ENOSF1Q7L5Y1 443 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 RABGGTAQ92696 567 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 FAM81BQ96LP2 452 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 ZNF560Q96MR9 790 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.78■□□□□ 0.6
RPL39-202ENST00000468844 RNF216Q9NWF9 866 aaPredicted RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 KANSL3Q9P2N6 904 aa18.78■□□□□ 0.6
RPL39-202ENST00000468844 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.78■□□□□ 0.6
RPL39-202ENST00000468844 PODXLO00592 558 aa18.77■□□□□ 0.6
RPL39-202ENST00000468844 SPTLC1O15269 473 aa18.77■□□□□ 0.6
RPL39-202ENST00000468844 LILRA4P59901 499 aa18.77■□□□□ 0.6
RPL39-202ENST00000468844 CCZ1BP86790 482 aa18.77■□□□□ 0.6
RPL39-202ENST00000468844 CCZ1P86791 482 aaPredicted RBP18.77■□□□□ 0.6
RPL39-202ENST00000468844 MEA1Q16626 185 aa18.77■□□□□ 0.6
RPL39-202ENST00000468844 BCO2Q9BYV7 579 aa18.77■□□□□ 0.6
RPL39-202ENST00000468844 NUCKS1Q9H1E3 243 aaKnown RBP18.77■□□□□ 0.6
RPL39-202ENST00000468844 AIPL1Q9NZN9 384 aa18.77■□□□□ 0.6
RPL39-202ENST00000468844 DGKIO75912 1065 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 AMHP03971 560 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 ACO1P21399 889 aaKnown RBP18.76■□□□□ 0.59
RPL39-202ENST00000468844 FECHP22830 423 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 SOX5P35711 763 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 PNPLA4P41247 253 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 TAF6P49848 677 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 RNASELQ05823 741 aaKnown RBP18.76■□□□□ 0.59
RPL39-202ENST00000468844 TMEM240Q5SV17 173 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 SFMBT2Q5VUG0 894 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 SYN2Q92777 582 aaPredicted RBP18.76■□□□□ 0.59
RPL39-202ENST00000468844 RC3H2Q9HBD1 1191 aaKnown RBP18.76■□□□□ 0.59
RPL39-202ENST00000468844 HCSTQ9UBK5 93 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 DNAJB4Q9UDY4 337 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 TBKBP1A7MCY6 615 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 FGBP02675 491 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 WEE2P0C1S8 567 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 RPL9P32969 192 aaKnown RBP18.76■□□□□ 0.59
RPL39-202ENST00000468844 STAT1P42224 750 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 RAP1GAPP47736 663 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 ARID5AQ03989 594 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 HGSNATQ68CP4 663 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 PSRC1Q6PGN9 363 aaPredicted RBP18.76■□□□□ 0.59
RPL39-202ENST00000468844 IRF2BP2Q7Z5L9 587 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 COLGALT2Q8IYK4 626 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 UBR7Q8N806 425 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 JAKMIP2Q96AA8 810 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 FAXDC2Q96IV6 333 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 CHP1Q99653 195 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 BAG1Q99933 345 aaPredicted RBP18.76■□□□□ 0.59
RPL39-202ENST00000468844 SMYD3Q9H7B4 428 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 SNX9Q9Y5X1 595 aa18.76■□□□□ 0.59
RPL39-202ENST00000468844 KPNA7A9QM74 516 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 GFPT2O94808 682 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 KCNJ6P48051 423 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 TNNC1P63316 161 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 FAM71AQ8IYT1 594 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 UROC1Q96N76 676 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 MRPL9Q9BYD2 267 aaKnown RBP18.75■□□□□ 0.59
RPL39-202ENST00000468844 SDCBP2Q9H190 292 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 CISHQ9NSE2 258 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 CXXC1Q9P0U4 656 aaPredicted RBP18.75■□□□□ 0.59
RPL39-202ENST00000468844 TRANK1O15050 2925 aa18.75■□□□□ 0.59
RPL39-202ENST00000468844 ZBBXA8MT70 800 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 F8W810 466 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 PLEKP08567 350 aaPredicted RBP18.74■□□□□ 0.59
RPL39-202ENST00000468844 P4HA1P13674 534 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 CD58P19256 250 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 CDH8P55286 799 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 TSR1Q2NL82 804 aaKnown RBP18.74■□□□□ 0.59
RPL39-202ENST00000468844 SV2CQ496J9 727 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 PAN2Q504Q3 1202 aaKnown RBP18.74■□□□□ 0.59
RPL39-202ENST00000468844 HS1BP3Q53T59 392 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 FAM117BQ6P1L5 589 aa18.74■□□□□ 0.59
RPL39-202ENST00000468844 RSPH1Q8WYR4 309 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms