RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ZNF518BQ9C0D4 1074 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 C11orf54Q9H0W9 315 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 EPC1Q9H2F5 836 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 CNTD2Q9H8S5 307 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 PCDH18Q9HCL0 1135 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 TM7SF3Q9NS93 570 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 KCND1Q9NSA2 647 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 IRAK4Q9NWZ3 460 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 CFAP97Q9P2B7 532 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 NESP48681 1621 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 KIF21AQ7Z4S6 1674 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 TCRBV7S2A1N4TA0A589 114 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM234BA2RU67 622 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 HMX3A6NHT5 357 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 PYCARD-AS1I3L0S3 204 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 TCERG1O14776 1098 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 NPC1O15118 1278 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 SNX2O60749 519 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 CNOT4O95628 575 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 POLBP06746 335 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 GJB1P08034 283 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 IFIT1P09914 478 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM163BP0C2L3 166 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 SERPINF1P36955 418 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 ITGA1P56199 1179 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 WNT3AP56704 352 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 PSMC1P62191 440 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 YBX1P67809 324 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 HTRA4P83105 476 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 ATP8B2P98198 1209 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 SMAD4Q13485 552 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 MTM1Q13496 603 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 PDE1CQ14123 709 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZNF792Q3KQV3 632 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 ADCK5Q3MIX3 580 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 PABPC1LQ4VXU2 614 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 PRAMEF14Q5SWL7 426 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 SULT6B1Q6IMI4 303 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 RETSATQ6NUM9 610 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 JMJD6Q6NYC1 403 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 CNKSR3Q6P9H4 555 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 WFDC3Q8IUB2 231 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 CCDC117Q8IWD4 279 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZDHHC14Q8IZN3 488 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 BCL6BQ8N143 479 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 DNAJC5GQ8N7S2 189 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 IL17REQ8NFR9 667 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 STYXQ8WUJ0 223 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 NKD2Q969F2 451 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 PRPF18Q99633 342 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 INO80BQ9C086 356 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 A1CFQ9NQ94 594 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 SIDT1Q9NXL6 827 aaKnown RBP4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZDHHC8Q9ULC8 765 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 RABGAP1Q9Y3P9 1069 aa4.33□□□□□ -1.72
HMGB1P25-201ENST00000468402 A0A1B0GVC2 190 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 TMEM233B4DJY2 109 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 RAB27BO00194 218 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 IPO5O00410 1097 aaKnown RBP4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 SYT5O00445 386 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 AREL1O15033 823 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 UNC5CO95185 931 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 TNFRSF6BO95407 300 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 MATN4O95460 622 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 ABHD16AO95870 558 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 SBK3P0C264 359 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 POLD1P28340 1107 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 ELF1P32519 619 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 CASRP41180 1078 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 KIR2DL3P43628 341 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 ALDH1A3P47895 512 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 RRADP55042 308 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 PTH1RQ03431 593 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 ADAM9Q13443 819 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 KCTD2Q14681 263 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 EIF4HQ15056 248 aaKnown RBP4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 RAB30Q15771 203 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 AMOTQ4VCS5 1084 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 ARHGAP15Q53QZ3 475 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 INTS11Q5TA45 600 aaKnown RBP4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 FYB2Q5VWT5 728 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 AFMIDQ63HM1 303 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 FAM180BQ6P0A1 224 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 KLHL17Q6TDP4 642 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 CATSPERGQ6ZRH7 1159 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 CLEC14AQ86T13 490 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 YAF2Q8IY57 180 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 COLGALT2Q8IYK4 626 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 TTLL6Q8N841 843 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 GPATCH11Q8N954 259 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 KYQ8NBH2 561 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 OR10H5Q8NGA6 315 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 CASKIN2Q8WXE0 1202 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 MAML1Q92585 1016 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 HDAC2Q92769 488 aaKnown RBP4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 ZBTB8AQ96BR9 441 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 MYOCQ99972 504 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 GORASP1Q9BQQ3 440 aa4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 C11orf84Q9BUA3 381 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P25-201ENST00000468402 CHST8Q9H2A9 424 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms