RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 BAATQ14032 418 aaPredicted RBP5.83□□□□□ -1.48
HMGB1-207ENST00000468384 ATP2B3Q16720 1220 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 PRRT3Q5FWE3 981 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 RABEPKQ7Z6M1 372 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 RSPH3Q86UC2 560 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 SLC9A9Q8IVB4 645 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 KLHDC4Q8TBB5 520 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 ING5Q8WYH8 240 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 MCRS1Q96EZ8 462 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 IGSF21Q96ID5 467 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 CITED4Q96RK1 184 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 FAM129BQ96TA1 746 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 APOL6Q9BWW8 343 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 TPSD1Q9BZJ3 242 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 RGS18Q9NS28 235 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 C1orf112Q9NSG2 853 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 SCHIP1Q9P0W5 487 aaPredicted RBP5.83□□□□□ -1.48
HMGB1-207ENST00000468384 STIM2Q9P246 746 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 PARP2Q9UGN5 583 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 SQORQ9Y6N5 450 aa5.83□□□□□ -1.48
HMGB1-207ENST00000468384 A0A0G2JK05 382 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 MYBPHLA2RUH7 354 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 DENND3A2RUS2 1198 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 SPECC1L-ADORA2AF8WAN1 911 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 ARNTLO00327 626 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 ELL2O00472 640 aaPredicted RBP5.82□□□□□ -1.48
HMGB1-207ENST00000468384 ZNF263O14978 683 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 N4BP3O15049 544 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 LILRA1O75019 489 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 LRG1P02750 347 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 RARAP10276 462 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 AKR1B1P15121 316 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 CD1EP15812 388 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 FCARP24071 287 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 RIPK4P57078 832 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 CTBSQ01459 385 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 RAD51AP2Q09MP3 1159 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 AAMPQ13685 434 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 TAF2Q6P1X5 1199 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 SEPT14Q6ZU15 432 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 ADGRA1Q86SQ6 560 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 STAG2Q8N3U4 1231 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 DMRTB1Q96MA1 342 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 FNBP1Q96RU3 617 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 MPHOSPH6Q99547 160 aaKnown RBP5.82□□□□□ -1.48
HMGB1-207ENST00000468384 DUSP9Q99956 384 aaKnown RBP5.82□□□□□ -1.48
HMGB1-207ENST00000468384 ADAM2Q99965 735 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 LATS2Q9NRM7 1088 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 RAB6BQ9NRW1 208 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 MRPL17Q9NRX2 175 aaKnown RBP5.82□□□□□ -1.48
HMGB1-207ENST00000468384 GDE1Q9NZC3 331 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 PNMA8BQ9ULN7 279 aaPredicted RBP5.82□□□□□ -1.48
HMGB1-207ENST00000468384 ENTPD4Q9Y227 616 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 USP3Q9Y6I4 520 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 FOCADQ5VW36 1801 aa5.82□□□□□ -1.48
HMGB1-207ENST00000468384 TNRC6BQ9UPQ9 1833 aaKnown RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 A6NJY4 79 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 B4E1Z4 1266 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 ZBTB39O15060 712 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 GAS2O43903 313 aaKnown RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 PRPF40AO75400 957 aaKnown RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 KRT7P08729 469 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 PSMC3P17980 439 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 ADORA1P30542 326 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 ADCY7P51828 1080 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 AK2P54819 239 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 FAM189BP81408 668 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 MRPS6P82932 125 aaKnown RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 USH1GQ495M9 461 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 SPDYCQ5MJ68 293 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 HES3Q5TGS1 186 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 NAA16Q6N069 864 aaPredicted RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 ALKBH2Q6NS38 261 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 VITQ6UXI7 678 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 DBX2Q6ZNG2 339 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 RALGPS2Q86X27 583 aaPredicted RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 FAM114A1Q8IWE2 563 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 ABI1Q8IZP0 508 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 POU5F2Q8N7G0 328 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 CSGALNACT1Q8TDX6 532 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 PDCD6IPQ8WUM4 868 aaKnown RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 LMBR1Q8WVP7 490 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 DNAJB3Q8WWF6 145 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 DNAAF4Q8WXU2 420 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 ELAC1Q9H777 363 aaKnown RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 ZFP14Q9HCL3 533 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.81□□□□□ -1.489e-13■■■■■ 192.3
HMGB1-207ENST00000468384 FEM1BQ9UK73 627 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 KCNH3Q9ULD8 1083 aa5.81□□□□□ -1.48
HMGB1-207ENST00000468384 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 PRRC2CQ9Y520 2896 aaKnown RBP5.81□□□□□ -1.48
HMGB1-207ENST00000468384 HELZP42694 1942 aaKnown RBP5.8□□□□□ -1.48
HMGB1-207ENST00000468384 ESPL1Q14674 2120 aa5.8□□□□□ -1.48
HMGB1-207ENST00000468384 PCLOQ9Y6V0 5065 aa5.8□□□□□ -1.48
HMGB1-207ENST00000468384 FLRT2O43155 660 aa5.8□□□□□ -1.48
HMGB1-207ENST00000468384 VPS4BO75351 444 aa5.8□□□□□ -1.48
HMGB1-207ENST00000468384 NDUFB10O96000 172 aa5.8□□□□□ -1.48
HMGB1-207ENST00000468384 C4BPAP04003 597 aaKnown RBP5.8□□□□□ -1.48
HMGB1-207ENST00000468384 SMTNP53814 917 aa5.8□□□□□ -1.48
HMGB1-207ENST00000468384 DYNLL1P63167 89 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms