RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 ELAVL2Q12926 359 aaKnown RBP18.37■□□□□ 0.53
VARS2-204ENST00000467717 ZNF699Q32M78 642 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 FUT10Q6P4F1 479 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 APTXQ7Z2E3 356 aaKnown RBP18.37■□□□□ 0.53
VARS2-204ENST00000467717 CCDC150Q8NCX0 1101 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 IMPG2Q9BZV3 1241 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 XYLT2Q9H1B5 865 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 RBSNQ9H1K0 784 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 VRTNQ9H8Y1 702 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 PUF60Q9UHX1 559 aaKnown RBP18.37■□□□□ 0.53
VARS2-204ENST00000467717 SF3B1O75533 1304 aaKnown RBP eCLIP18.37■□□□□ 0.53
VARS2-204ENST00000467717 CITO14578 2027 aa18.37■□□□□ 0.53
VARS2-204ENST00000467717 VCANP13611 3396 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 GTPBP10A4D1E9 387 aaKnown RBP18.36■□□□□ 0.53
VARS2-204ENST00000467717 KPNA7A9QM74 516 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 ASS1P00966 412 aaKnown RBP18.36■□□□□ 0.53
VARS2-204ENST00000467717 FNDC1Q4ZHG4 1894 aaPredicted RBP18.36■□□□□ 0.53
VARS2-204ENST00000467717 TIGD5Q53EQ6 642 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 DSTYKQ6XUX3 929 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 DDX53Q86TM3 631 aaKnown RBP18.36■□□□□ 0.53
VARS2-204ENST00000467717 FBXO22Q8NEZ5 403 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 ARNTL2Q8WYA1 636 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 SEMA4DQ92854 862 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 SUSD3Q96L08 255 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 CERS4Q9HA82 394 aa18.36■□□□□ 0.53
VARS2-204ENST00000467717 CDH23Q9H251 3354 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 ARHGEF37A1IGU5 675 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 LGALS16A8MUM7 142 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 H3BNC9 293 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 CLSTN1O94985 981 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 EFEMP2O95967 443 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 SERPINC1P01008 464 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 BRCC3P46736 316 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 FANCCQ00597 558 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 UBE3AQ05086 875 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 WDR72Q3MJ13 1102 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 FILIP1LQ4L180 1135 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 WDR44Q5JSH3 913 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 FKBP15Q5T1M5 1219 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 GBP6Q6ZN66 633 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 EHBP1Q8NDI1 1231 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 SENP8Q96LD8 212 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 GPR62Q9BZJ7 368 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 ZNF576Q9H609 170 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 GDAP2Q9NXN4 497 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 LZTS1Q9Y250 596 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 RALGAPA2Q2PPJ7 1873 aa18.35■□□□□ 0.53
VARS2-204ENST00000467717 I3L4J1 428 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 M0QZQ0 153 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 SYN3O14994 580 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 SOD2P04179 222 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 GPM6BQ13491 265 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 EXOC3L4Q17RC7 722 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 ZNF667Q5HYK9 610 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 FAM171A1Q5VUB5 890 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 RNF168Q8IYW5 571 aaPredicted RBP18.34■□□□□ 0.53
VARS2-204ENST00000467717 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 CRACR2AQ9BSW2 395 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 PI4K2AQ9BTU6 479 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 VN1R3Q9BXE9 311 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 ALG13Q9NP73 1137 aaKnown RBP18.34■□□□□ 0.53
VARS2-204ENST00000467717 GCNT4Q9P109 453 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 SNX9Q9Y5X1 595 aa18.34■□□□□ 0.53
VARS2-204ENST00000467717 A0A1B0GTH6 734 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 CYB561D2O14569 222 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 HUS1O60921 280 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 LRRN2O75325 713 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 P4HA1P13674 534 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 TNNC1P63316 161 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 NOP14P78316 857 aaKnown RBP18.33■□□□□ 0.52
VARS2-204ENST00000467717 UBXN1Q04323 297 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 USP41Q3LFD5 358 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.33■□□□□ 0.52
VARS2-204ENST00000467717 DPH6Q7L8W6 267 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 VPS52Q8N1B4 723 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 TOP6BLQ8N6T0 577 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 APPL2Q8NEU8 664 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 LMO3Q8TAP4 145 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 POF1BQ8WVV4 589 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 FAXDC2Q96IV6 333 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 HERC2P3Q9BVR0 1158 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 INTS2Q9H0H0 1204 aaKnown RBP18.33■□□□□ 0.52
VARS2-204ENST00000467717 RTN4Q9NQC3 1192 aaKnown RBP18.33■□□□□ 0.52
VARS2-204ENST00000467717 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.33■□□□□ 0.525e-7■■■■■ 26.9
VARS2-204ENST00000467717 NXF1Q9UBU9 619 aaKnown RBP18.33■□□□□ 0.52
VARS2-204ENST00000467717 PCDHB8Q9UN66 801 aa18.33■□□□□ 0.52
VARS2-204ENST00000467717 GRM6O15303 877 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 ODC1P11926 461 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 TYMPP19971 482 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 FGFR3P22607 806 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 SPOPLQ6IQ16 392 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 KIAA1841Q6NSI8 718 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
VARS2-204ENST00000467717 NT5C1BQ96P26 610 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 MMS19Q96T76 1030 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 TTPALQ9BTX7 342 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 NIF3L1Q9GZT8 377 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 APOBEC3GQ9HC16 384 aaKnown RBP18.32■□□□□ 0.52
VARS2-204ENST00000467717 PRDM6Q9NQX0 595 aa18.32■□□□□ 0.52
VARS2-204ENST00000467717 CHST7Q9NS84 486 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms