RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 DIRC3C9JPN6 131 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 BTN3A1O00481 513 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 FOXS1O43638 330 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 ABHD16AO95870 558 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 HDCP19113 662 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 ZNF543Q08ER8 600 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 TCF15Q12870 199 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 DAG1Q14118 895 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 KRT72Q14CN4 511 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 DGKKQ5KSL6 1271 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 UTP14CQ5TAP6 766 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 HTR3DQ70Z44 454 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 SGCZQ96LD1 299 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 P2RX7Q99572 595 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 BRIP1Q9BX63 1249 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 CPEB1Q9BZB8 566 aaKnown RBP6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 ZNF518BQ9C0D4 1074 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 ARFGAP3Q9NP61 516 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 PLCB1Q9NQ66 1216 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 CORO2BQ9UQ03 480 aa6.19□□□□□ -1.42
GAPVD1-211ENST00000467707 TRIM43BA6NCK2 446 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 DRGXA6NNA5 263 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 GPR42O15529 346 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 SLC13A2Q13183 592 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 AMOTQ4VCS5 1084 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 IZUMO3Q5VZ72 239 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 EXOC8Q8IYI6 725 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 TBC1D15Q8TC07 691 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 ATXN2LQ8WWM7 1075 aaKnown RBP6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 TRIM43Q96BQ3 446 aaPredicted RBP6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 RIPOR3Q96MK2 946 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 MOGAT1Q96PD6 335 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 CNPPD1Q9BV87 410 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 CPNE7Q9UBL6 633 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 DAAM1Q9Y4D1 1078 aa6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.18□□□□□ -1.42
GAPVD1-211ENST00000467707 ZNF785A8K8V0 405 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 CAPN14A8MX76 684 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 IFRD1O00458 451 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 KPNA5O15131 536 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 AGFG2O95081 481 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 PARP1P09874 1014 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 CKBP12277 381 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 XRCC6P12956 609 aaKnown RBP eCLIP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 GCSHP23434 173 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 TNFSF4P23510 183 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 STT3AP46977 705 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 PSMC1P62191 440 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 PIGFQ07326 219 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 SPOCD1Q6ZMY3 1216 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 MED25Q71SY5 747 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 SESTD1Q86VW0 696 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 SGMS1Q86VZ5 419 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 RHOT2Q8IXI1 618 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 SDR16C5Q8N3Y7 309 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 CELF5Q8N6W0 485 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 MB21D1Q8N884 522 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 RNF169Q8NCN4 708 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 DNERQ8NFT8 737 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 IPCEF1Q8WWN9 437 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 EDAQ92838 391 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 DCLRE1CQ96SD1 692 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 POLR3GLQ9BT43 218 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 TINAGL1Q9GZM7 467 aaPredicted RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 A1CFQ9NQ94 594 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 STK32BQ9NY57 414 aa6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 CNOT11Q9UKZ1 510 aaKnown RBP6.17□□□□□ -1.42
GAPVD1-211ENST00000467707 ABHD14A-ACY1A0A1B0GW23 586 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 MBD3L4A6NDZ8 208 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 MBD3L3A6NE82 208 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 POM121BA6NF01 834 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 MYO1CO00159 1063 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 ITGB1P05556 798 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 PIM1P11309 404 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 CYP2C9P11712 490 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 TSHRP16473 764 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 HK1P19367 917 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 MAN2A2P49641 1150 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 ZNF135P52742 658 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 CHN2P52757 468 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 RABGGTBP53611 331 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 MAMDC4Q6UXC1 1216 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 USP37Q86T82 979 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 KLHL32Q96NJ5 620 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 MED15Q96RN5 788 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 SSBP3Q9BWW4 388 aaPredicted RBP6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 ADAM7Q9H2U9 754 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 SMURF2Q9HAU4 748 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 SACM1LQ9NTJ5 587 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 COL20A1Q9P218 1284 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 NEU2Q9Y3R4 380 aa6.16□□□□□ -1.42
GAPVD1-211ENST00000467707 A0A087WWL8 130 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 LOC102724159A0A0B4J2E5 919 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 DNAJB5O75953 348 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 FGF18O76093 207 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 UNC5CO95185 931 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 ITGB3P05106 788 aa6.15□□□□□ -1.42
GAPVD1-211ENST00000467707 GRPP07492 148 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms