RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 UPP1Q16831 310 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 CTXN3Q4LDR2 81 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 USP39Q53GS9 565 aaKnown RBP11.28□□□□□ -0.6
HDAC3-203ENST00000467533 TMC8Q8IU68 726 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 NOSTRINQ8IVI9 506 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 C4orf19Q8IY42 314 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 ACDQ96AP0 544 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 TCEANC2Q96MN5 208 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
HDAC3-203ENST00000467533 LRRC3BQ96PB8 259 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 ADPGKQ9BRR6 497 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 NFKBIZQ9BYH8 718 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 PDZD7Q9H5P4 517 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 PRMT7Q9NVM4 692 aaPredicted RBP11.28□□□□□ -0.6
HDAC3-203ENST00000467533 THG1LQ9NWX6 298 aaKnown RBP11.28□□□□□ -0.6
HDAC3-203ENST00000467533 OBP2AQ9NY56 170 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 EBF1Q9UH73 591 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
HDAC3-203ENST00000467533 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 NAV2Q8IVL1 2488 aa11.28□□□□□ -0.6
HDAC3-203ENST00000467533 PRAMEF12O95522 483 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 PLA2G2AP14555 144 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 GLRA2P23416 452 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 FAM193AP78312 1265 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 AKAP17AQ02040 695 aaKnown RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 SEMA3BQ13214 749 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 PPP2R5CQ13362 524 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 PLD1Q13393 1074 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 GPR158Q5T848 1215 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 CREB3L3Q68CJ9 461 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 ZNF280DQ6N043 979 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 CD300LGQ6UXG3 332 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 ARMCX6Q7L4S7 300 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 SYT13Q7L8C5 426 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 TSTD1Q8NFU3 115 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 PRIMPOLQ96LW4 560 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 PPP1R10Q96QC0 940 aaKnown RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 UBL7Q96S82 380 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 GTPBP2Q9BX10 602 aaKnown RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 C22orf23Q9BZE7 217 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 POLR3FQ9H1D9 316 aaPredicted RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 DDX25Q9UHL0 483 aaKnown RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 VAV3Q9UKW4 847 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 TPCN1Q9ULQ1 816 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 ATXN2Q99700 1313 aaKnown RBP11.27□□□□□ -0.61
HDAC3-203ENST00000467533 ABCA7Q8IZY2 2146 aa11.27□□□□□ -0.61
HDAC3-203ENST00000467533 CYP3A7-CYP3A51PA0A087WV96 503 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 CCDC196A0A1B0GTZ2 297 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 UPK3BL1B0FP48 263 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 UPK3BL2E5RIL1 263 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 TRDMT1O14717 391 aaKnown RBP11.26□□□□□ -0.61
HDAC3-203ENST00000467533 SYN3O14994 580 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 ZBTB39O15060 712 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 DRD1P21728 446 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 CYP3A7P24462 503 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 ARL2P36404 184 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 CYP4A11Q02928 519 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 PSMD2Q13200 908 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 CTTNQ14247 550 aaKnown RBP11.26□□□□□ -0.61
HDAC3-203ENST00000467533 ARHGAP15Q53QZ3 475 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 NCAPH2Q6IBW4 605 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 PPP4R3AQ6IN85 833 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 PPP4R3CPQ6ZMV5 832 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 RNF19BQ6ZMZ0 732 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 ZBTB8OSQ8IWT0 167 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 DYDC2Q96IM9 177 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 LRRC3Q9BY71 257 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 ATXN3LQ9H3M9 355 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 ZSWIM4Q9H7M6 989 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 RGL1Q9NZL6 768 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 CIZ1Q9ULV3 898 aaPredicted RBP11.26□□□□□ -0.61
HDAC3-203ENST00000467533 MAFFQ9ULX9 164 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 NUB1Q9Y5A7 615 aa11.26□□□□□ -0.61
HDAC3-203ENST00000467533 PLXNB3Q9ULL4 1909 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 CACNA1EQ15878 2313 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 SHROOM3Q8TF72 1996 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 PCNX2A6NKB5 2137 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 PODXLO00592 558 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 PRPF3O43395 683 aaKnown RBP11.25□□□□□ -0.61
HDAC3-203ENST00000467533 SLC37A4O43826 429 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 OPHN1O60890 802 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 DGAT1O75907 488 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 C1QL1O75973 258 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 CFIP05156 583 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 LIG1P18858 919 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 U2AF2P26368 475 aaKnown RBP eCLIP11.25□□□□□ -0.616e-7■■■■■ 29.6
HDAC3-203ENST00000467533 EPHB3P54753 998 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 NLRP5P59047 1200 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 AMPD2Q01433 879 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
HDAC3-203ENST00000467533 RUNX3Q13761 415 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 EPHA7Q15375 998 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 MAPK6Q16659 721 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 FBXO43Q4G163 708 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 ANO7Q6IWH7 933 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 MOXD1Q6UVY6 613 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 SLC39A7Q92504 469 aa11.25□□□□□ -0.61
HDAC3-203ENST00000467533 EXOC4Q96A65 974 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms