RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 MMRN2Q9H8L6 949 aa16.34■□□□□ 0.21
NPHP4-205ENST00000466897 NUB1Q9Y5A7 615 aa16.34■□□□□ 0.21
NPHP4-205ENST00000466897 TRIOBPQ9H2D6 2365 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 A0A1B0GTH6 734 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 TADA2AO75478 443 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 FGF18O76093 207 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 ITGB1P05556 798 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 FAM163BP0C2L3 166 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 PBX3P40426 434 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 MYL6P60660 151 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 KRT17Q04695 432 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 ZNF699Q32M78 642 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 FILIP1LQ4L180 1135 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 FUT10Q6P4F1 479 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 GBP6Q6ZN66 633 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 DPH6Q7L8W6 267 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 DDX53Q86TM3 631 aaKnown RBP16.33■□□□□ 0.2
NPHP4-205ENST00000466897 GPR65Q8IYL9 337 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 TMEM130Q8N3G9 435 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 CCDC150Q8NCX0 1101 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 SPATA18Q8TC71 538 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 BCL7CQ8WUZ0 217 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-205ENST00000466897 SEMA4DQ92854 862 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 C17orf80Q9BSJ5 609 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 VPS16Q9H269 839 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 FAM124BQ9H5Z6 455 aaPredicted RBP16.33■□□□□ 0.2
NPHP4-205ENST00000466897 CHD7Q9P2D1 2997 aa16.33■□□□□ 0.2
NPHP4-205ENST00000466897 NT5C1B-RDH14C9J2C7 533 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 F8W810 466 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 H3BNC9 293 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 SYN3O14994 580 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 SPTLC1O15269 473 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 SERPINC1P01008 464 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 P4HA1P13674 534 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 NOP14P78316 857 aaKnown RBP16.32■□□□□ 0.2
NPHP4-205ENST00000466897 FANCCQ00597 558 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 EXOC3L4Q17RC7 722 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 UVSSAQ2YD98 709 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 TIGD5Q53EQ6 642 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 FKBP15Q5T1M5 1219 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 SCARA3Q6AZY7 606 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 GPR153Q6NV75 609 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 SARM1Q6SZW1 724 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
NPHP4-205ENST00000466897 LIMS2Q7Z4I7 341 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 TOP6BLQ8N6T0 577 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 KLHL23Q8NBE8 558 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 FBXO22Q8NEZ5 403 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 RABGGTAQ92696 567 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 ERGIC2Q96RQ1 377 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 HERC2P3Q9BVR0 1158 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 RTN4Q9NQC3 1192 aaKnown RBP16.32■□□□□ 0.2
NPHP4-205ENST00000466897 GCNT4Q9P109 453 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 PCDHB8Q9UN66 801 aa16.32■□□□□ 0.2
NPHP4-205ENST00000466897 SOD2P04179 222 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 CYP11A1P05108 521 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 ODC1P11926 461 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 TYMPP19971 482 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 FGFR3P22607 806 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 ZNF667Q5HYK9 610 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 WDR44Q5JSH3 913 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 TRIM65Q6PJ69 517 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 HASPINQ8TF76 798 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 SENP8Q96LD8 212 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 FAM81BQ96LP2 452 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 VN1R3Q9BXE9 311 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 GPR62Q9BZJ7 368 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 LMAN2LQ9H0V9 348 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 CHST7Q9NS84 486 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
NPHP4-205ENST00000466897 DSEQ9UL01 958 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 DAAM1Q9Y4D1 1078 aa16.31■□□□□ 0.2
NPHP4-205ENST00000466897 TRANK1O15050 2925 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 A0A1W2PQC6 194 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 PES1O00541 588 aaKnown RBP16.3■□□□□ 0.2
NPHP4-205ENST00000466897 IGFBP6P24592 240 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-205ENST00000466897 PON1P27169 355 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 BRCC3P46736 316 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 UBASH3AP57075 661 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 TNNC1P63316 161 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 NR1I3Q14994 352 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 WDR72Q3MJ13 1102 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 DSTYKQ6XUX3 929 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 TMEM86AQ8N2M4 240 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 APPL2Q8NEU8 664 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 SPPL3Q8TCT6 385 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 BCO2Q9BYV7 579 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 NIF3L1Q9GZT8 377 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 INTS2Q9H0H0 1204 aaKnown RBP16.3■□□□□ 0.2
NPHP4-205ENST00000466897 ZNF576Q9H609 170 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 APOBEC3GQ9HC16 384 aaKnown RBP16.3■□□□□ 0.2
NPHP4-205ENST00000466897 PLCB1Q9NQ66 1216 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 SNX9Q9Y5X1 595 aa16.3■□□□□ 0.2
NPHP4-205ENST00000466897 CYB561D2O14569 222 aa16.29■□□□□ 0.2
NPHP4-205ENST00000466897 CBFA2T2O43439 604 aa16.29■□□□□ 0.2
NPHP4-205ENST00000466897 TACC1O75410 805 aa16.29■□□□□ 0.2
NPHP4-205ENST00000466897 TPM3P06753 285 aa16.29■□□□□ 0.2
NPHP4-205ENST00000466897 RFX1P22670 979 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms