RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 PRKCQQ04759 706 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 MRPL58Q14197 206 aaKnown RBP19■□□□□ 0.63
COL7A1-206ENST00000466591 SLC5A9Q2M3M2 681 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 ZC2HC1CQ53FD0 456 aaPredicted RBP19■□□□□ 0.63
COL7A1-206ENST00000466591 SLC44A4Q53GD3 710 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 ZBTB41Q5SVQ8 909 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 ZC3H14Q6PJT7 736 aaKnown RBP19■□□□□ 0.63
COL7A1-206ENST00000466591 RNF19BQ6ZMZ0 732 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 SFR1Q86XK3 245 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 PJA1Q8NG27 643 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 FAM200AQ8TCP9 573 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 BRD9Q9H8M2 597 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 ZFP14Q9HCL3 533 aa19■□□□□ 0.63
COL7A1-206ENST00000466591 DOCK8Q8NF50 2099 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 A0A0B4J269 797 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 KANSL1LA0AUZ9 987 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 M0QZQ0 153 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 MEFVO15553 781 aaPredicted RBP18.99■□□□□ 0.63
COL7A1-206ENST00000466591 ECI2O75521 394 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 GCNT3O95395 438 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 GAP43P17677 238 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 PAX3P23760 479 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 POSTNQ15063 836 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 STK38Q15208 465 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 TAF12Q16514 161 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 SPATA1Q5VX52 437 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 HVCN1Q96D96 273 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 HINFPQ9BQA5 517 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 AVENQ9NQS1 362 aaPredicted RBP18.99■□□□□ 0.63
COL7A1-206ENST00000466591 SPATA6Q9NWH7 488 aaPredicted RBP18.99■□□□□ 0.63
COL7A1-206ENST00000466591 TBC1D7Q9P0N9 293 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 SEL1LQ9UBV2 794 aa18.99■□□□□ 0.63
COL7A1-206ENST00000466591 MRPS17Q9Y2R5 130 aaKnown RBP18.99■□□□□ 0.63
COL7A1-206ENST00000466591 R3HCC1Q9Y3T6 440 aaKnown RBP18.99■□□□□ 0.63
COL7A1-206ENST00000466591 SRPRBQ9Y5M8 271 aaKnown RBP18.99■□□□□ 0.63
COL7A1-206ENST00000466591 NCAM2O15394 837 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 TBC1D4O60343 1298 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 NFICP08651 508 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 OR4Q2P0C623 313 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 FAM173BQ6P4H8 233 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 TPRG1Q6ZUI0 275 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 YAF2Q8IY57 180 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 THEM5Q8N1Q8 247 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 LRRC15Q8TF66 581 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 ELSPBP1Q96BH3 223 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 CLIC6Q96NY7 704 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 ZSCAN16Q9H4T2 348 aaPredicted RBP18.98■□□□□ 0.63
COL7A1-206ENST00000466591 ASB7Q9H672 318 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 FBXO2Q9UK22 296 aaPredicted RBP18.98■□□□□ 0.63
COL7A1-206ENST00000466591 CPSF3Q9UKF6 684 aaKnown RBP18.98■□□□□ 0.63
COL7A1-206ENST00000466591 DSEQ9UL01 958 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 DERAQ9Y315 318 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 YIPF1Q9Y548 306 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 MYH15Q9Y2K3 1946 aa18.98■□□□□ 0.63
COL7A1-206ENST00000466591 PDCD11Q14690 1871 aaKnown RBP18.97■□□□□ 0.63
COL7A1-206ENST00000466591 PRR23AA6NEV1 266 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 ANKRD63C9JTQ0 380 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 PROB1E7EW31 1015 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 OAZ2O95190 189 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 STARD6P59095 220 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 DUSP4Q13115 394 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 RESTQ13127 1097 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 GRM2Q14416 872 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 VEPH1Q14D04 833 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 ZBTB6Q15916 424 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 C9orf57Q5W0N0 161 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 USP49Q70CQ1 688 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 ASCL5Q7RTU5 278 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 HS6ST3Q8IZP7 471 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 TMEM130Q8N3G9 435 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 KCNN1Q92952 543 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 TCEAL4Q96EI5 215 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 INTS4Q96HW7 963 aaKnown RBP18.97■□□□□ 0.63
COL7A1-206ENST00000466591 SENP8Q96LD8 212 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 GCNAQ96QF7 691 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 ACCSQ96QU6 501 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 TRMT61BQ9BVS5 477 aaKnown RBP18.97■□□□□ 0.63
COL7A1-206ENST00000466591 PANK2Q9BZ23 570 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 PCDHB13Q9Y5F0 798 aa18.97■□□□□ 0.63
COL7A1-206ENST00000466591 FAM170BA6NMN3 283 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 K7ELQ4 463 aaPredicted RBP18.96■□□□□ 0.63
COL7A1-206ENST00000466591 LAMTOR5O43504 91 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 TYMPP19971 482 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 TAF6P49848 677 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 LILRA4P59901 499 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 MYBPC2Q14324 1141 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 PTPAQ15257 358 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 FAM78AQ5JUQ0 283 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 TANGO2Q6ICL3 276 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 ZNF852Q6ZMS4 543 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 STXBP4Q6ZWJ1 553 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 ZNF720Q7Z2F6 126 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 ITIH5Q86UX2 942 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 C1orf210Q8IVY1 113 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 SMARCD2Q92925 531 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 SEPT5Q99719 369 aaPredicted RBP18.96■□□□□ 0.63
COL7A1-206ENST00000466591 PYM1Q9BRP8 204 aaKnown RBP18.96■□□□□ 0.63
COL7A1-206ENST00000466591 GPR88Q9GZN0 384 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 DPP3Q9NY33 737 aa18.96■□□□□ 0.63
COL7A1-206ENST00000466591 C2CD2Q9Y426 696 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms