RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CNNM4Q6P4Q7 775 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 RSPO2Q6UXX9 243 aaPredicted RBP10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 HS2ST1Q7LGA3 356 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 CBWD2Q8IUF1 395 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 KREMEN2Q8NCW0 462 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 ERCC4Q92889 916 aaPredicted RBP10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 CLSTN3Q9BQT9 956 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 ASB7Q9H672 318 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 PIDD1Q9HB75 910 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 PDE11AQ9HCR9 933 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 AGPAT3Q9NRZ7 376 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 DPP3Q9NY33 737 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 FNIP2Q9P278 1114 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 POLIQ9UNA4 740 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 MAPK8IP1Q9UQF2 711 aa10.54□□□□□ -0.72
RTFDC1-205ENST00000466260 FAM237AA0A1B0GTK4 181 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 CCDC195A0A1B0GUA6 201 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 TGFB1I1O43294 461 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 GADD45BO75293 160 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 IL18RAPO95256 599 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 MBD3O95983 291 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 C8AP07357 584 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ADRB2P07550 413 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 CPB1P15086 417 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 CYP3A5P20815 502 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 POLR2BP30876 1174 aaKnown RBP10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ROR1Q01973 937 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 DPYDQ12882 1025 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 DSG2Q14126 1118 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 KLHL40Q2TBA0 621 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 LIN9Q5TKA1 542 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ZNF280DQ6N043 979 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 PDXDC1Q6P996 788 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ELMSAN1Q6PJG2 1045 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 TMEM92Q6UXU6 159 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ANKS3Q6ZW76 656 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 USP37Q86T82 979 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ADHFE1Q8IWW8 467 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 KHSRPQ92945 711 aaKnown RBP eCLIP10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 SUSD3Q96L08 255 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 RIPOR3Q96MK2 946 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 POP1Q99575 1024 aaKnown RBP10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 PHF7Q9BWX1 381 aaPredicted RBP10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 MTMR12Q9C0I1 747 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ADAM7Q9H2U9 754 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 MTRRQ9UBK8 725 aa10.53□□□□□ -0.72
RTFDC1-205ENST00000466260 ZNF233A6NK53 670 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 H7C4K7 107 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SYN3O14994 580 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SPTLC1O15269 473 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 CCL16O15467 120 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 EXOC3O60645 756 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 OR4Q2P0C623 313 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 DLATP10515 647 aaKnown RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 MTHFRP42898 656 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 TAF6P49848 677 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 YWHAHQ04917 246 aaPredicted RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 ITIH3Q06033 890 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 BFSP1Q12934 665 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 KNOP1Q1ED39 458 aaKnown RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 PPM1LQ5SGD2 360 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 ATAT1Q5SQI0 421 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 ISM2Q6H9L7 571 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SMYD4Q8IYR2 804 aaPredicted RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 FMR1NBQ8N0W7 255 aaPredicted RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 XXYLT1Q8NBI6 393 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SLC7A14Q8TBB6 771 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SUSD6Q92537 303 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SMG7Q92540 1137 aaKnown RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SYAP1Q96A49 352 aaPredicted RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 CCDC127Q96BQ5 260 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 CCDC34Q96HJ3 373 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 ANKRD36BP1Q96IX9 119 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 SENP8Q96LD8 212 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 PGLYRP2Q96PD5 576 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 PRKAG3Q9UGI9 489 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 FBXL5Q9UKA1 691 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 FBXW11Q9UKB1 542 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 AGAP1Q9UPQ3 857 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 DERAQ9Y315 318 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 C2CD2Q9Y426 696 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 MYO10Q9HD67 2058 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 PTPRJQ12913 1337 aa10.52□□□□□ -0.73
RTFDC1-205ENST00000466260 WDR27A2RRH5 827 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 C2CD4DB7Z1M9 353 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 MYL1P05976 194 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 ODC1P11926 461 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 TNNI1P19237 187 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 ELF1P32519 619 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 LILRA4P59901 499 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 FAM160A1Q05DH4 1040 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 PSMD2Q13200 908 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 SNRNP35Q16560 246 aaKnown RBP10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 BMT2Q1RMZ1 405 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 SV2CQ496J9 727 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 CEP135Q66GS9 1140 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 SCARA3Q6AZY7 606 aa10.51□□□□□ -0.73
RTFDC1-205ENST00000466260 CCDC149Q6ZUS6 474 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms