RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 M0QZQ0 153 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 SYN3O14994 580 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 CETN3O15182 167 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 ADAM12O43184 909 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 TBX10O75333 385 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 AKAP3O75969 853 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 ADH1AP07327 375 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 AARSP49588 968 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHPF2-202ENST00000465601 TAF6P49848 677 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 RBP5P82980 135 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 CLUL1Q15846 466 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
CHPF2-202ENST00000465601 TRAPPC11Q7Z392 1133 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 PPFIBP1Q86W92 1011 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 PALB2Q86YC2 1186 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHPF2-202ENST00000465601 TRIML1Q8N9V2 468 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 CXorf38Q8TB03 319 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 NELFBQ8WX92 580 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 CLSTN3Q9BQT9 956 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 ITGA11Q9UKX5 1188 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 PCDHB8Q9UN66 801 aa13.36□□□□□ -0.27
CHPF2-202ENST00000465601 FSD2A1L4K1 749 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 LRRIQ3A6PVS8 624 aaPredicted RBP13.35□□□□□ -0.27
CHPF2-202ENST00000465601 SPATA31D3P0C874 917 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 PSMC2P35998 433 aaKnown RBP13.35□□□□□ -0.27
CHPF2-202ENST00000465601 PPP1R2P41236 205 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 CLCN4P51793 760 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 STX17P56962 302 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 DLG4P78352 724 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 MRPL58Q14197 206 aaKnown RBP13.35□□□□□ -0.27
CHPF2-202ENST00000465601 PDXDC1Q6P996 788 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 RSPO2Q6UXX9 243 aaPredicted RBP13.35□□□□□ -0.27
CHPF2-202ENST00000465601 TMEM184AQ6ZMB5 413 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 SPATA31D4Q6ZUB0 917 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 FAM186BQ8IYM0 893 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 APPL2Q8NEU8 664 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 TMC2Q8TDI7 906 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 CASP10Q92851 521 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 BORCS6Q96GS4 357 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 ZNF560Q96MR9 790 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 CTNND2Q9UQB3 1225 aa13.35□□□□□ -0.27
CHPF2-202ENST00000465601 R3HCC1Q9Y3T6 440 aaKnown RBP13.35□□□□□ -0.27
CHPF2-202ENST00000465601 CUL9Q8IWT3 2517 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 KPNA7A9QM74 516 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 CYB561D2O14569 222 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 MAPK13O15264 365 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 TGM5O43548 720 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 GLUD1P00367 558 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 CST3P01034 146 aaPredicted RBP13.34□□□□□ -0.27
CHPF2-202ENST00000465601 PAX3P23760 479 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 OR1D2P34982 312 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 PNPLA4P41247 253 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 KCNQ1P51787 676 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 VAMP7P51809 220 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 MRPS5P82675 430 aaKnown RBP13.34□□□□□ -0.27
CHPF2-202ENST00000465601 FKBP3Q00688 224 aaKnown RBP13.34□□□□□ -0.27
CHPF2-202ENST00000465601 CREMQ03060 361 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 LRRC63Q05C16 580 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 BFSP1Q12934 665 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 LEXMQ3ZCV2 418 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 SV2CQ496J9 727 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 CTXN3Q4LDR2 81 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 ANKRD54Q6NXT1 300 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 USP37Q86T82 979 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 C12orf76Q8N812 135 aaPredicted RBP13.34□□□□□ -0.27
CHPF2-202ENST00000465601 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.34□□□□□ -0.27
CHPF2-202ENST00000465601 ATXN2LQ8WWM7 1075 aaKnown RBP13.34□□□□□ -0.27
CHPF2-202ENST00000465601 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 DUSP9Q99956 384 aaKnown RBP13.34□□□□□ -0.27
CHPF2-202ENST00000465601 APOL5Q9BWW9 433 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 BACE2Q9Y5Z0 518 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 CDY1Q9Y6F8 540 aa13.34□□□□□ -0.27
CHPF2-202ENST00000465601 H7C4K7 107 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 TBC1D4O60343 1298 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 PHACTR2O75167 634 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 MBD3O95983 291 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 C4BPAP04003 597 aaKnown RBP13.33□□□□□ -0.28
CHPF2-202ENST00000465601 TRIM49P0CI25 452 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 TRIM49CP0CI26 452 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 SRGAP2BP0DMP2 458 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 EPB41P11171 864 aaKnown RBP13.33□□□□□ -0.28
CHPF2-202ENST00000465601 ODC1P11926 461 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 KRT13P13646 458 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 TYMPP19971 482 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 ARPP19P56211 112 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 CLDN10P78369 228 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 YWHAHQ04917 246 aaPredicted RBP13.33□□□□□ -0.28
CHPF2-202ENST00000465601 PAK1Q13153 545 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 BIRC3Q13489 604 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 TRPC3Q13507 836 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 AAK1Q2M2I8 961 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 WSCD1Q658N2 575 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 TTI2Q6NXR4 508 aa13.33□□□□□ -0.28
CHPF2-202ENST00000465601 LILRA6Q6PI73 481 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms