RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 WT1P19544 449 aaPredicted RBP6.84□□□□□ -1.31
SMC4-205ENST00000465563 POU3F3P20264 500 aaPredicted RBP6.84□□□□□ -1.31
SMC4-205ENST00000465563 GPD1P21695 349 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 SLC16A1P53985 500 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 DYRK1AQ13627 763 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 PTPRRQ15256 657 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 CD300EQ496F6 205 aaPredicted RBP6.84□□□□□ -1.31
SMC4-205ENST00000465563 ZNF788Q6ZQV5 615 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 CNTD1Q8N815 330 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 TOR1AIP2Q8NFQ8 470 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 LPIN2Q92539 896 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 PGBD1Q96JS3 809 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 KLHL32Q96NJ5 620 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 PUS7LQ9H0K6 701 aaKnown RBP6.84□□□□□ -1.31
SMC4-205ENST00000465563 SLC5A4Q9NY91 659 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 VSX1Q9NZR4 365 aaPredicted RBP6.84□□□□□ -1.31
SMC4-205ENST00000465563 MCM8Q9UJA3 840 aa6.84□□□□□ -1.31
SMC4-205ENST00000465563 ARHGEF17Q96PE2 2063 aaPredicted RBP6.84□□□□□ -1.31
SMC4-205ENST00000465563 SGTAO43765 313 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 SLC43A1O75387 559 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 ABCG1P45844 678 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 ANXA11P50995 505 aaKnown RBP6.83□□□□□ -1.32
SMC4-205ENST00000465563 PREPLQ4J6C6 727 aaPredicted RBP6.83□□□□□ -1.32
SMC4-205ENST00000465563 PAPD7Q5XG87 772 aaKnown RBP6.83□□□□□ -1.32
SMC4-205ENST00000465563 TSHZ1Q6ZSZ6 1077 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 SH2D3CQ8N5H7 860 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 JADE3Q92613 823 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 SARAFQ96BY9 339 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 FAM126AQ9BYI3 521 aaPredicted RBP6.83□□□□□ -1.32
SMC4-205ENST00000465563 MKS1Q9NXB0 559 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 TUBD1Q9UJT1 453 aa6.83□□□□□ -1.32
SMC4-205ENST00000465563 CCDC195A0A1B0GUA6 201 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 SUN1O94901 812 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 SOX10P56693 466 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 ZNF280AP59817 542 aaPredicted RBP6.82□□□□□ -1.32
SMC4-205ENST00000465563 PIGFQ07326 219 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 SRSF4Q08170 494 aaKnown RBP6.82□□□□□ -1.32
SMC4-205ENST00000465563 RAB39AQ14964 217 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 ACAP2Q15057 778 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 INAVAQ3KP66 663 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 TSTD2Q5T7W7 516 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 GADL1Q6ZQY3 521 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 ZNF365Q70YC5 407 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 ADGRG5Q8IZF4 528 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 CFAP52Q8N1V2 620 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 AOPEPQ8N6M6 819 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 SNX19Q92543 992 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 ANKS1AQ92625 1134 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 IMPG2Q9BZV3 1241 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 WDR26Q9H7D7 661 aa6.82□□□□□ -1.32
SMC4-205ENST00000465563 DNAJC9-AS1A6NH13 148 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 TOR1BO14657 336 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 CD1AP06126 327 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 C5AR1P21730 350 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 PROK1P58294 105 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 FLYWCH1Q4VC44 716 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 MICALCLQ6ZW33 695 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 PTF1AQ7RTS3 328 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 NSUN7Q8NE18 718 aaKnown RBP6.81□□□□□ -1.32
SMC4-205ENST00000465563 C1orf162Q8NEQ5 155 aaPredicted RBP6.81□□□□□ -1.32
SMC4-205ENST00000465563 MYCBPAPQ8TBZ2 947 aa6.81□□□□□ -1.32
SMC4-205ENST00000465563 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.81□□□□□ -1.32
SMC4-205ENST00000465563 ADM5C9JUS6 153 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 CHRM2P08172 466 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 POU6F2P78424 691 aaPredicted RBP6.8□□□□□ -1.32
SMC4-205ENST00000465563 HLXQ14774 488 aaPredicted RBP6.8□□□□□ -1.32
SMC4-205ENST00000465563 PPP4R3AQ6IN85 833 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 NECAB2Q7Z6G3 386 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 CBARPQ8N350 705 aaPredicted RBP6.8□□□□□ -1.32
SMC4-205ENST00000465563 SLC17A8Q8NDX2 589 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 TMIEQ8NEW7 156 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 MRGPRX4Q96LA9 322 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 SLC29A3Q9BZD2 475 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 CALCOCO1Q9P1Z2 691 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 SLC45A2Q9UMX9 530 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 IPPQ9Y573 584 aa6.8□□□□□ -1.32
SMC4-205ENST00000465563 KLHL33A6NCF5 533 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 E7ENX8 843 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 HTRA2O43464 458 aaPredicted RBP6.79□□□□□ -1.32
SMC4-205ENST00000465563 ELFN1P0C7U0 828 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 PPP3CBP16298 524 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 IARSP41252 1262 aaKnown RBP6.79□□□□□ -1.32
SMC4-205ENST00000465563 NXPH1P58417 271 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 MC2RQ01718 297 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 TAP2Q03519 686 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 ITIH3Q06033 890 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 IL10RAQ13651 578 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 TXNRD1Q16881 649 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 EPHA10Q5JZY3 1008 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 DDX42Q86XP3 938 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMC4-205ENST00000465563 PDPRQ8NCN5 879 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 B3GALNT2Q8NCR0 500 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 SMG7Q92540 1137 aaKnown RBP6.79□□□□□ -1.32
SMC4-205ENST00000465563 FAXDC2Q96IV6 333 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 CLPTM1LQ96KA5 538 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 LIMCH1Q9UPQ0 1083 aa6.79□□□□□ -1.32
SMC4-205ENST00000465563 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
SMC4-205ENST00000465563 CGB1A6NKQ9 187 aa6.78□□□□□ -1.32
SMC4-205ENST00000465563 ANXA1P04083 346 aa6.78□□□□□ -1.32
SMC4-205ENST00000465563 TLE1Q04724 770 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms