RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CEP57Q86XR8 500 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 LRRC52Q8N7C0 313 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 TMC2Q8TDI7 906 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 ZNF516Q92618 1163 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 POP1Q99575 1024 aaKnown RBP21.94■■□□□ 1.1
SKA3-205ENST00000465471 TSG101Q99816 390 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 CLSTN3Q9BQT9 956 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 MKNK1Q9BUB5 465 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 BACE2Q9Y5Z0 518 aa21.94■■□□□ 1.1
SKA3-205ENST00000465471 LRRIQ3A6PVS8 624 aaPredicted RBP21.93■■□□□ 1.1
SKA3-205ENST00000465471 TBC1D4O60343 1298 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 TNNC2P02585 160 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 ADH1AP07327 375 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 PNPLA4P41247 253 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 NDUFV1P49821 464 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 TAF6P49848 677 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 VARS2Q5ST30 1063 aaKnown RBP21.93■■□□□ 1.1
SKA3-205ENST00000465471 C1orf220Q5T0J3 134 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 TTI2Q6NXR4 508 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 ANKS3Q6ZW76 656 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 MSLNLQ96KJ4 702 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 ZNF560Q96MR9 790 aa21.93■■□□□ 1.1
SKA3-205ENST00000465471 EPCAMP16422 314 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 RPL17P18621 184 aaKnown RBP21.92■■□□□ 1.1
SKA3-205ENST00000465471 TNNI1P19237 187 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 TYMPP19971 482 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 KLRC2P26717 231 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 PSMC2P35998 433 aaKnown RBP21.92■■□□□ 1.1
SKA3-205ENST00000465471 RBP5P82980 135 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 FKBP3Q00688 224 aaKnown RBP21.92■■□□□ 1.1
SKA3-205ENST00000465471 TFF2Q03403 129 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 INTS8Q75QN2 995 aaKnown RBP21.92■■□□□ 1.1
SKA3-205ENST00000465471 TRAPPC11Q7Z392 1133 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 FAM186BQ8IYM0 893 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 CSGALNACT2Q8N6G5 542 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 APPL2Q8NEU8 664 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 CASP10Q92851 521 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 SENP8Q96LD8 212 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 DUSP9Q99956 384 aaKnown RBP21.92■■□□□ 1.1
SKA3-205ENST00000465471 BARX2Q9UMQ3 279 aaPredicted RBP21.92■■□□□ 1.1
SKA3-205ENST00000465471 AGAP1Q9UPQ3 857 aa21.92■■□□□ 1.1
SKA3-205ENST00000465471 MTCL1Q9Y4B5 1905 aaKnown RBP21.91■■□□□ 1.1
SKA3-205ENST00000465471 CETN3O15182 167 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 SLC16A3O15427 465 aaKnown RBP21.91■■□□□ 1.1
SKA3-205ENST00000465471 ADAM12O43184 909 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 CYP11A1P05108 521 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 KCNA5P22460 613 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 AP3M2P53677 418 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 DLG4P78352 724 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 LEXMQ3ZCV2 418 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 SV2CQ496J9 727 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 SLC8B1Q6J4K2 584 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 RSPO2Q6UXX9 243 aaPredicted RBP21.91■■□□□ 1.1
SKA3-205ENST00000465471 DSTYKQ6XUX3 929 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.91■■□□□ 1.1
SKA3-205ENST00000465471 ATXN2LQ8WWM7 1075 aaKnown RBP21.91■■□□□ 1.1
SKA3-205ENST00000465471 NELFBQ8WX92 580 aa21.91■■□□□ 1.1
SKA3-205ENST00000465471 KPNA7A9QM74 516 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 IKBKBO14920 756 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 OAZ2O95190 189 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 C4BPAP04003 597 aaKnown RBP21.9■■□□□ 1.1
SKA3-205ENST00000465471 SRGAP2BP0DMP2 458 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 ODC1P11926 461 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 BFSP1Q12934 665 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 PAK1Q13153 545 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 KLHL10Q6JEL2 608 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 ANKRD54Q6NXT1 300 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 LLGL2Q6P1M3 1020 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 LILRA6Q6PI73 481 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 GDAP2Q9NXN4 497 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 CTNND2Q9UQB3 1225 aa21.9■■□□□ 1.1
SKA3-205ENST00000465471 BICDL2A1A5D9 508 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 H3BQ06 376 aaPredicted RBP21.89■■□□□ 1.09
SKA3-205ENST00000465471 H7C4K7 107 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 TULP1O00294 542 aaPredicted RBP21.89■■□□□ 1.09
SKA3-205ENST00000465471 GLUD1P00367 558 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 VAMP7P51809 220 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 RAB33AQ14088 237 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 TDRD10Q5VZ19 366 aaKnown RBP21.89■■□□□ 1.09
SKA3-205ENST00000465471 ZNF280DQ6N043 979 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 SYCE2Q6PIF2 218 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 C15orf39Q6ZRI6 1047 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 USP37Q86T82 979 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 MLKLQ8NB16 471 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 EEF2KMTQ96G04 330 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 CEP63Q96MT8 703 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 DZANK1Q9NVP4 752 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 FBXL5Q9UKA1 691 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 CDY1Q9Y6F8 540 aa21.89■■□□□ 1.09
SKA3-205ENST00000465471 ARHGEF37A1IGU5 675 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 TGM5O43548 720 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 PAPLNO95428 1278 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 STAU1O95793 577 aaKnown RBP21.88■■□□□ 1.09
SKA3-205ENST00000465471 CST3P01034 146 aaPredicted RBP21.88■■□□□ 1.09
SKA3-205ENST00000465471 KRT19P08727 400 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 EPB41P11171 864 aaKnown RBP21.88■■□□□ 1.09
SKA3-205ENST00000465471 MRPS5P82675 430 aaKnown RBP21.88■■□□□ 1.09
SKA3-205ENST00000465471 YWHAHQ04917 246 aaPredicted RBP21.88■■□□□ 1.09
SKA3-205ENST00000465471 ZACNQ401N2 412 aa21.88■■□□□ 1.09
SKA3-205ENST00000465471 LIMS2Q7Z4I7 341 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms