RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 TMC8Q8IU68 726 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 BSNDQ8WZ55 320 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 CHFRQ96EP1 664 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 LRRC3Q9BY71 257 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 RNF26Q9BY78 433 aaPredicted RBP16.47■□□□□ 0.23
HDAC6-214ENST00000465269 CRISPLD1Q9H336 500 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 FZD8Q9H461 694 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 FBRSL1Q9HCM7 1045 aaKnown RBP16.47■□□□□ 0.23
HDAC6-214ENST00000465269 GPSM3Q9Y4H4 160 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 NEUROG3Q9Y4Z2 214 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 CFAP46Q8IYW2 2715 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 N4BP3O15049 544 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 TRAPPC3O43617 180 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 RNF40O75150 1001 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 VNN2O95498 520 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 EGFP01133 1207 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 GBP1P32455 592 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 CDR1P51861 262 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 IRX4P78413 519 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 AAMPQ13685 434 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 ELF2Q15723 593 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 CTXN3Q4LDR2 81 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 RNF20Q5VTR2 975 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 C1orf228Q6PIY5 440 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 PPP4R3CPQ6ZMV5 832 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 SYNPOQ8N3V7 929 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 CEP120Q8N960 986 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 FAM20AQ96MK3 541 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 PGLYRP2Q96PD5 576 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 TMEM209Q96SK2 561 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 DNAJC25Q9H1X3 360 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 POLD4Q9HCU8 107 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 PRMT7Q9NVM4 692 aaPredicted RBP16.46■□□□□ 0.23
HDAC6-214ENST00000465269 KCNJ14Q9UNX9 436 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 MSRB2Q9Y3D2 182 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 YIPF1Q9Y548 306 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 ACACAQ13085 2346 aa16.46■□□□□ 0.23
HDAC6-214ENST00000465269 CCDC163A0A0D9SF12 145 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 OTOL1A6NHN0 477 aaPredicted RBP16.45■□□□□ 0.22
HDAC6-214ENST00000465269 CYSRT1A8MQ03 144 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 DGAT1O75907 488 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 AKAP3O75969 853 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 OR4Q2P0C623 313 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 IFNAR1P17181 557 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 PRPF4BQ13523 1007 aaKnown RBP16.45■□□□□ 0.22
HDAC6-214ENST00000465269 EIF2AK1Q9BQI3 630 aaKnown RBP16.45■□□□□ 0.22
HDAC6-214ENST00000465269 KIFC3Q9BVG8 833 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 SH3GLB2Q9NR46 395 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 NID2Q14112 1375 aa16.45■□□□□ 0.22
HDAC6-214ENST00000465269 SMIM28A0A1B0GU29 152 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 PODXLO00592 558 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 DPYSL4O14531 572 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 KHNYNO15037 678 aaKnown RBP16.44■□□□□ 0.22
HDAC6-214ENST00000465269 MEFVO15553 781 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-214ENST00000465269 MARCH6O60337 910 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 CCNT1O60563 726 aaKnown RBP16.44■□□□□ 0.22
HDAC6-214ENST00000465269 SOAT2O75908 522 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 CAPNS1P04632 268 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 NEFLP07196 543 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 CPB1P15086 417 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 MAPK8P45983 427 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 RARRES1P49788 294 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 OSTNP61366 133 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 MRPL58Q14197 206 aaKnown RBP16.44■□□□□ 0.22
HDAC6-214ENST00000465269 ARHGAP29Q52LW3 1261 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 TPGS2Q68CL5 300 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 CDCA2Q69YH5 1023 aaPredicted RBP16.44■□□□□ 0.22
HDAC6-214ENST00000465269 TRIM68Q6AZZ1 485 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 GAREM2Q75VX8 874 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 PROSER1Q86XN7 944 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 CHCHD4Q8N4Q1 142 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 E2F7Q96AV8 911 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 ZMAT2Q96NC0 199 aaKnown RBP16.44■□□□□ 0.22
HDAC6-214ENST00000465269 C22orf23Q9BZE7 217 aa16.44■□□□□ 0.22
HDAC6-214ENST00000465269 AFF4Q9UHB7 1163 aaKnown RBP16.44■□□□□ 0.22
HDAC6-214ENST00000465269 FAM205CA6NFA0 338 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 RHOBTB1O94844 696 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 SEC24BO95487 1268 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 BCKDHBP21953 392 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 FAM193AP78312 1265 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 SIM1P81133 766 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-214ENST00000465269 CYP4F8P98187 520 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 ITPRIPL2Q3MIP1 535 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 TMEM196Q5HYL7 178 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 GPR158Q5T848 1215 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 C18orf25Q96B23 403 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-214ENST00000465269 PRIMPOLQ96LW4 560 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 CCDC43Q96MW1 224 aaKnown RBP16.43■□□□□ 0.22
HDAC6-214ENST00000465269 POLR3CQ9BUI4 534 aaPredicted RBP16.43■□□□□ 0.22
HDAC6-214ENST00000465269 TPSD1Q9BZJ3 242 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 THADAQ6YHU6 1953 aa16.43■□□□□ 0.22
HDAC6-214ENST00000465269 ANTXRLA6NF34 631 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 H7C4K7 107 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 FAM187BQ17R55 369 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 EARS2Q5JPH6 523 aaKnown RBP16.42■□□□□ 0.22
HDAC6-214ENST00000465269 NT5DC1Q5TFE4 455 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 HAUS6Q7Z4H7 955 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 ZBTB8OSQ8IWT0 167 aa16.42■□□□□ 0.22
HDAC6-214ENST00000465269 TTC9BQ8N6N2 239 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms