RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TRPV2Q9Y5S1 764 aa15.56■□□□□ 0.08
COL5A1-205ENST00000464187 DNM1LO00429 736 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 CHRNA1P02708 482 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 STAG3L1P0CL83 205 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 CXCL8P10145 99 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 ABCB4P21439 1286 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 THPOP40225 353 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 GYS2P54840 703 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 RNASE9P60153 205 aaKnown RBP15.55■□□□□ 0.08
COL5A1-205ENST00000464187 PTK7Q13308 1070 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 SLC27A1Q6PCB7 646 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 DAAM2Q86T65 1068 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 SYCE1Q8N0S2 351 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 FBXL13Q8NEE6 735 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 SLC35G2Q8TBE7 412 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 FAM71BQ8TC56 605 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 TAS1R2Q8TE23 839 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 KREMEN1Q96MU8 473 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 KRT12Q99456 494 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 CGRRF1Q99675 332 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 ZMYND15Q9H091 742 aa15.55■□□□□ 0.08
COL5A1-205ENST00000464187 RPF1Q9H9Y2 349 aaKnown RBP15.55■□□□□ 0.08
COL5A1-205ENST00000464187 PIN4Q9Y237 131 aaKnown RBP15.55■□□□□ 0.08
COL5A1-205ENST00000464187 A0A0U1RQG5 324 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 C4BPAP04003 597 aaKnown RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 CLTAP09496 248 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 AXLP30530 894 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 ZACNQ401N2 412 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 FAM228AQ86W67 206 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 SLC43A3Q8NBI5 491 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 OR5B17Q8NGF7 314 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 ACTRT1Q8TDG2 376 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 SENP6Q9GZR1 1112 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 THAP2Q9H0W7 228 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 MED4Q9NPJ6 270 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 RAB20Q9NX57 234 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 PRDM4Q9UKN5 801 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 FAN1Q9Y2M0 1017 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 NOC2LQ9Y3T9 749 aaKnown RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 FAM170AA1A519 330 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 ANKRD62A6NC57 917 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 CEP104O60308 925 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 BUB1BO60566 1050 aaPredicted RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 NPTXRO95502 500 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 GLI1P08151 1106 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 HSPA8P11142 646 aaKnown RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 EPHB4P54760 987 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 MGAT3Q09327 533 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 SURF1Q15526 300 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 KYAT1Q16773 422 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 DCAF4L1Q3SXM0 396 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 TDRD10Q5VZ19 366 aaKnown RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 CTU1Q7Z7A3 348 aaKnown RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 WDR49Q8IV35 697 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 FAM71AQ8IYT1 594 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 DHX38Q92620 1227 aaKnown RBP15.54■□□□□ 0.08
COL5A1-205ENST00000464187 HES6Q96HZ4 224 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 GDF3Q9NR23 364 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 VPS18Q9P253 973 aa15.54■□□□□ 0.08
COL5A1-205ENST00000464187 ZSCAN5CA6NGD5 496 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 ARVCFO00192 962 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 B4GALT4O60513 344 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 RPS6KA5O75582 802 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 HEXIM1O94992 359 aaKnown RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 IL18RAPO95256 599 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 SYF2O95926 243 aaKnown RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 CHRNB2P17787 502 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 TNNC1P63316 161 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 POU5F1Q01860 360 aaKnown RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 BIRC3Q13489 604 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 SND1Q7KZF4 910 aaKnown RBP eCLIP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 APBB1IPQ7Z5R6 666 aaPredicted RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 RPUSD2Q8IZ73 545 aaKnown RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 PPM1KQ8N3J5 372 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 RASGEF1CQ8N431 466 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 EPS8L1Q8TE68 723 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 ACAP3Q96P50 834 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 EIF2AQ9BY44 585 aaKnown RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 TRPV6Q9H1D0 765 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 NOCTQ9UK39 431 aaKnown RBP15.53■□□□□ 0.08
COL5A1-205ENST00000464187 AMFRQ9UKV5 643 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 OGDHLQ9ULD0 1010 aa15.53■□□□□ 0.08
COL5A1-205ENST00000464187 PGRMC1O00264 195 aaKnown RBP15.52■□□□□ 0.08
COL5A1-205ENST00000464187 MEFVO15553 781 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-205ENST00000464187 SGPL1O95470 568 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 GRM5P41594 1212 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 AP3M2P53677 418 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 HSP90B2PQ58FF3 399 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 NOP9Q86U38 636 aaKnown RBP15.52■□□□□ 0.08
COL5A1-205ENST00000464187 HELQQ8TDG4 1101 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 SHC3Q92529 594 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.52■□□□□ 0.08
COL5A1-205ENST00000464187 TRIM6Q9C030 488 aaPredicted RBP15.52■□□□□ 0.08
COL5A1-205ENST00000464187 MTMR12Q9C0I1 747 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 ISCUQ9H1K1 167 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 COG5Q9UP83 839 aa15.52■□□□□ 0.08
COL5A1-205ENST00000464187 LACTBL1A8MY62 500 aa15.52■□□□□ 0.07
COL5A1-205ENST00000464187 DDX3YO15523 660 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms