RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 GADL1Q6ZQY3 521 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 RAB24Q969Q5 203 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 FBXL20Q96IG2 436 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 FAXDC2Q96IV6 333 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 UROC1Q96N76 676 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 TLR10Q9BXR5 811 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 SPC25Q9HBM1 224 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 TUBD1Q9UJT1 453 aa5.54□□□□□ -1.52
ITGB1-208ENST00000464001 LRRC3CA6NJW4 275 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 PROM1O43490 865 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 SLC43A1O75387 559 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 C1QL1O75973 258 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 SBK3P0C264 359 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 C5AR1P21730 350 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 GATA3P23771 443 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 IARSP41252 1262 aaKnown RBP5.53□□□□□ -1.52
ITGB1-208ENST00000464001 PIGFQ07326 219 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 DYRK1AQ13627 763 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 CBARPQ8N350 705 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-208ENST00000464001 CALCOCO1Q9P1Z2 691 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 CTTNBP2NLQ9P2B4 639 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.53□□□□□ -1.52
ITGB1-208ENST00000464001 FRMD4BQ9Y2L6 1034 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 MRFAP1Q9Y605 127 aa5.53□□□□□ -1.52
ITGB1-208ENST00000464001 CCDC195A0A1B0GUA6 201 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 RBMXL2O75526 392 aaKnown RBP5.52□□□□□ -1.53
ITGB1-208ENST00000464001 MT-CO1P00395 513 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 ANXA11P50995 505 aaKnown RBP5.52□□□□□ -1.53
ITGB1-208ENST00000464001 ZNF280AP59817 542 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-208ENST00000464001 PTPRRQ15256 657 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 CD300EQ496F6 205 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-208ENST00000464001 PREPLQ4J6C6 727 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-208ENST00000464001 SYDE2Q5VT97 1194 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 ZNF365Q70YC5 407 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 SLC30A5Q8TAD4 765 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 PGBD1Q96JS3 809 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 CLPTM1LQ96KA5 538 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 KLHL32Q96NJ5 620 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 TIMP4Q99727 224 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 IMPG2Q9BZV3 1241 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 MAN1C1Q9NR34 630 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 IL17RBQ9NRM6 502 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 ASB6Q9NWX5 421 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 ARPP21Q9UBL0 812 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-208ENST00000464001 ATP8A1Q9Y2Q0 1164 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 IPPQ9Y573 584 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 ENTPD2Q9Y5L3 495 aa5.52□□□□□ -1.53
ITGB1-208ENST00000464001 TOR1BO14657 336 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 HTRA2O43464 458 aaPredicted RBP5.51□□□□□ -1.53
ITGB1-208ENST00000464001 XPOTO43592 962 aaKnown RBP5.51□□□□□ -1.53
ITGB1-208ENST00000464001 ANXA1P04083 346 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 CD1AP06126 327 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 MYBL2P10244 700 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 GRIA3P42263 894 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 HNRNPA0Q13151 305 aaKnown RBP5.51□□□□□ -1.53
ITGB1-208ENST00000464001 IL10RAQ13651 578 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 HLXQ14774 488 aaPredicted RBP5.51□□□□□ -1.53
ITGB1-208ENST00000464001 LRCH2Q5VUJ6 765 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 MICALCLQ6ZW33 695 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 CFAP52Q8N1V2 620 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 SLC17A8Q8NDX2 589 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 TOR1AIP2Q8NFQ8 470 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 TFAP2BQ92481 460 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 SNX19Q92543 992 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 MRGPRX4Q96LA9 322 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 LIMCH1Q9UPQ0 1083 aa5.51□□□□□ -1.53
ITGB1-208ENST00000464001 CCDC154A6NI56 674 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 E7ENX8 843 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 INO80B-WBP1J3KQ70 363 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 SUN1O94901 812 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 GPD1P21695 349 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 MAPK10P53779 464 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 SOX10P56693 466 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 POU6F2P78424 691 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-208ENST00000464001 KIF23Q02241 960 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-208ENST00000464001 TAP2Q03519 686 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 TLE1Q04724 770 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 PEG10Q86TG7 708 aaKnown RBP5.5□□□□□ -1.53
ITGB1-208ENST00000464001 LPIN2Q92539 896 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 COA7Q96BR5 231 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 INO80BQ9C086 356 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-208ENST00000464001 CPNE5Q9HCH3 593 aa5.5□□□□□ -1.53
ITGB1-208ENST00000464001 VSX1Q9NZR4 365 aaPredicted RBP5.5□□□□□ -1.53
ITGB1-208ENST00000464001 SHTN1A0MZ66 631 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 PCDHGA12O60330 932 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 WT1P19544 449 aaPredicted RBP5.49□□□□□ -1.53
ITGB1-208ENST00000464001 GUCY2FP51841 1108 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 NXPH1P58417 271 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 KRT85P78386 507 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 C3orf36Q3SXR2 165 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 FLYWCH1Q4VC44 716 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 TSHZ1Q6ZSZ6 1077 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 TTC7BQ86TV6 843 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
ITGB1-208ENST00000464001 ADGRG5Q8IZF4 528 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 PDPRQ8NCN5 879 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 B3GALNT2Q8NCR0 500 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 NSUN7Q8NE18 718 aaKnown RBP5.49□□□□□ -1.53
ITGB1-208ENST00000464001 TMIEQ8NEW7 156 aa5.49□□□□□ -1.53
ITGB1-208ENST00000464001 SMOQ99835 787 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms