RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 TRIM49P0CI25 452 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 TRIM49CP0CI26 452 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 SCP2P22307 547 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 CD52P31358 61 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 RFC5P40937 340 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 NOP2P46087 812 aaKnown RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 DEFB103AP81534 67 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 ENOX2Q16206 610 aaKnown RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 PPP2R5EQ16537 467 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 KIZQ2M2Z5 673 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 XKR9Q5GH70 373 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 ZNF697Q5TEC3 545 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 PLA2G4FQ68DD2 849 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 PHLDB3Q6NSJ2 640 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GJB7Q6PEY0 223 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 PEX26Q7Z412 305 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 NT5DC3Q86UY8 548 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 KSR1Q8IVT5 923 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GOLGA6L1Q8N7Z2 621 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 C1orf131Q8NDD1 294 aaKnown RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 TMEM40Q8WWA1 233 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 SLC7A3Q8WY07 619 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 CCDC43Q96MW1 224 aaKnown RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 PSMB7Q99436 277 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 IKZF4Q9H2S9 585 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 TTYH1Q9H313 450 aaPredicted RBP10.62□□□□□ -0.71
PTPRD-207ENST00000463477 HSPBP1Q9NZL4 362 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 EHD2Q9NZN4 543 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GINS2Q9Y248 185 aa10.62□□□□□ -0.71
PTPRD-207ENST00000463477 GOLGA8KD6RF30 607 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 KCNK3O14649 394 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 HEXIM1O94992 359 aaKnown RBP10.61□□□□□ -0.71
PTPRD-207ENST00000463477 SLC34A2O95436 690 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 TNFAIP3P21580 790 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 EIF4BP23588 611 aaKnown RBP10.61□□□□□ -0.71
PTPRD-207ENST00000463477 ACTN2P35609 894 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 GGCXP38435 758 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 GPC3P51654 580 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 RABGGTBP53611 331 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 DRP2Q13474 957 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 CUL1Q13616 776 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 C1orf220Q5T0J3 134 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 SND1Q7KZF4 910 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPRD-207ENST00000463477 Q7L0L9 218 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 RTN4RL1Q86UN2 441 aaPredicted RBP10.61□□□□□ -0.71
PTPRD-207ENST00000463477 MAP4K3Q8IVH8 894 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 RHOT2Q8IXI1 618 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 CTNNBL1Q8WYA6 563 aaPredicted RBP10.61□□□□□ -0.71
PTPRD-207ENST00000463477 KIFAP3Q92845 792 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 RAD9AQ99638 391 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 SLITRK6Q9H5Y7 841 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 ZNF576Q9H609 170 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 SLC28A3Q9HAS3 691 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 SMARCAL1Q9NZC9 954 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 KCNG1Q9UIX4 513 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 AMFRQ9UKV5 643 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 YBX2Q9Y2T7 364 aaKnown RBP10.61□□□□□ -0.71
PTPRD-207ENST00000463477 COQ4Q9Y3A0 265 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 NOC2LQ9Y3T9 749 aaKnown RBP10.61□□□□□ -0.71
PTPRD-207ENST00000463477 CDH23Q9H251 3354 aa10.61□□□□□ -0.71
PTPRD-207ENST00000463477 A6NNZ2 444 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 ASAP2O43150 1006 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 TLL1O43897 1013 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 DGAT1O75907 488 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 MTA2O94776 668 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 GLI1P08151 1106 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 GZMAP12544 262 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 GTF2H1P32780 548 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 MATR3P43243 847 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 SMTNP53814 917 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 POLGP54098 1239 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 SLC7A5Q01650 507 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 TUBB8Q3ZCM7 444 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 ZNF410Q86VK4 478 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 GLYCTKQ8IVS8 523 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 CD302Q8IX05 232 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 GSPT2Q8IYD1 628 aaKnown RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 TMC2Q8TDI7 906 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 TCP11Q8WWU5 503 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 OSMRQ99650 979 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 AGPAT1Q99943 283 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 ZBED2Q9BTP6 218 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 ISCUQ9H1K1 167 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 CARD9Q9H257 536 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 TSPYL2Q9H2G4 693 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 FAM204AQ9H8W3 233 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 ERVK-5Q9HDB9 667 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 ST3GAL5Q9UNP4 418 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 MYO9BQ13459 2157 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 H0YCG3 227 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 FOXN3O00409 490 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 MYOGP15173 224 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 LMAN1P49257 510 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 HTRA4P83105 476 aaPredicted RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 PPP3CAQ08209 521 aa10.6□□□□□ -0.71
PTPRD-207ENST00000463477 NFX1Q12986 1120 aaKnown RBP10.6□□□□□ -0.71
PTPRD-207ENST00000463477 C11orf63Q6NUN7 778 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms