RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 PAEPP09466 180 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TRIM49P0CI25 452 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TRIM49CP0CI26 452 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 SLC9A1P19634 815 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TYMPP19971 482 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 POLR2BP30876 1174 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 HNRNPH3P31942 346 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 KRT9P35527 623 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CYLC1P35663 651 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 GNL1P36915 607 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 PBX1P40424 430 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 OR1G1P47890 313 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 POLR2FP61218 127 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 WDR5P61964 334 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 NOP14P78316 857 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 KRT83P78385 493 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 UBE3AQ05086 875 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 DSC1Q08554 894 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 KCNMA1Q12791 1236 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CUL2Q13617 745 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 RAB30Q15771 203 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CBWD6Q4V339 395 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CBWD3Q5JTY5 395 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CBWD5Q5RIA9 395 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TDRD10Q5VZ19 366 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 KIAA1841Q6NSI8 718 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CYP26C1Q6V0L0 522 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 RTL10Q7L3V2 364 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 RRAGAQ7L523 313 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 OTOP2Q7RTS6 562 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TMC6Q7Z403 805 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 DCP1BQ8IZD4 617 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CEP120Q8N960 986 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 C1orf127Q8N9H9 656 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 MSANTD4Q8NCY6 345 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 HELQQ8TDG4 1101 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TAS1R2Q8TE23 839 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CPLX3Q8WVH0 158 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 ZNF689Q96CS4 500 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TMEM169Q96HH4 297 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CCDC42Q96M95 316 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 ZNF558Q96NG5 402 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 NOX5Q96PH1 765 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 PPP1R9BQ96SB3 815 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CRACR2AQ9BSW2 395 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 LSM14BQ9BX40 385 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 ZNF518BQ9C0D4 1074 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 NIF3L1Q9GZT8 377 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 PDCL3Q9H2J4 239 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 FAM207AQ9NSI2 230 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 TBC1D13Q9NVG8 400 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 SPG21Q9NZD8 308 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 NXF1Q9UBU9 619 aaKnown RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 BARX2Q9UMQ3 279 aaPredicted RBP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 SIK3Q9Y2K2 1263 aa7.93□□□□□ -1.14
EPHA4-210ENST00000463446 SF3B1O75533 1304 aaKnown RBP eCLIP7.93□□□□□ -1.14
EPHA4-210ENST00000463446 CYB561D2O14569 222 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 TEX33O43247 280 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ACRP10323 421 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 DESP17661 470 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 CASP14P31944 242 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 SOX5P35711 763 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 SCNN1GP51170 649 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 MYL6P60660 151 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 HTRA4P83105 476 aaPredicted RBP7.92□□□□□ -1.14
EPHA4-210ENST00000463446 RAPGEF1Q13905 1077 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 SPA17Q15506 151 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 MEA1Q16626 185 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 USP41Q3LFD5 358 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ZBTB41Q5SVQ8 909 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 C1orf220Q5T0J3 134 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 TRIM72Q6ZMU5 477 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ANKS3Q6ZW76 656 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 HERC6Q8IVU3 1022 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 TMEM192Q8IY95 271 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 COLGALT2Q8IYK4 626 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 GSTCDQ8NEC7 633 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 OR5B17Q8NGF7 314 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 LMO3Q8TAP4 145 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 C2orf15Q8WU43 125 aaKnown RBP7.92□□□□□ -1.14
EPHA4-210ENST00000463446 LPPQ93052 612 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 RNPC3Q96LT9 517 aaKnown RBP7.92□□□□□ -1.14
EPHA4-210ENST00000463446 CEP295NLQ96MC4 621 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ZFP42Q96MM3 310 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ZMAT2Q96NC0 199 aaKnown RBP7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ACBD6Q9BR61 282 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 NT5C1AQ9BXI3 368 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 BCO2Q9BYV7 579 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 IKZF4Q9H2S9 585 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 DEF6Q9H4E7 631 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.92□□□□□ -1.14
EPHA4-210ENST00000463446 EHD2Q9NZN4 543 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 LCMT1Q9UIC8 334 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ADAM28Q9UKQ2 775 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 CNTN6Q9UQ52 1028 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 LZTS1Q9Y250 596 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 PCDHA11Q9Y5I1 949 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 SNX9Q9Y5X1 595 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 ATP8B3O60423 1300 aa7.92□□□□□ -1.14
EPHA4-210ENST00000463446 SSU72P8A0A1W2PR75 194 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms