RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 PPEF2O14830 753 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 NUCB2P80303 420 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 EHHADHQ08426 723 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 TPGS2Q68CL5 300 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 GRAMD1CQ8IYS0 662 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 GPD1LQ8N335 351 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 ZSWIM2Q8NEG5 633 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 CACTINQ8WUQ7 758 aaKnown RBP17.57■□□□□ 0.4
COL1A1-202ENST00000463440 PAGE5Q96GU1 130 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 LIMD1Q9UGP4 676 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 HPSEQ9Y251 543 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 TCHHQ07283 1943 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 A0A1W2PQ27 194 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 A0A1W2PQ64 194 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 A0A1W2PQD8 194 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 WDR27A2RRH5 827 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 PRRG1O14668 218 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 CCL16O15467 120 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 ABLIM3O94929 683 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 OAZ2O95190 189 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 MYL1P05976 194 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 POU2F2P09086 479 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 ODC1P11926 461 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 ATF2P15336 505 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 TYMPP19971 482 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 GBP2P32456 591 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-202ENST00000463440 SYKP43405 635 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 SNRPFP62306 86 aaKnown RBP17.56■□□□□ 0.4
COL1A1-202ENST00000463440 TFAMQ00059 246 aaKnown RBP17.56■□□□□ 0.4
COL1A1-202ENST00000463440 EFCAB13Q8IY85 973 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 SENP8Q96LD8 212 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 KIAA1586Q9HCI6 787 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 EXOC1Q9NV70 894 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL1A1-202ENST00000463440 MAFFQ9ULX9 164 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 POLIQ9UNA4 740 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 SORCS3Q9UPU3 1222 aa17.56■□□□□ 0.4
COL1A1-202ENST00000463440 TIMM13Q9Y5L4 95 aaPredicted RBP17.56■□□□□ 0.4
COL1A1-202ENST00000463440 FAM237AA0A1B0GTK4 181 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 ZNF233A6NK53 670 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 OR6C75A6NL08 312 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 CPB1P15086 417 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 COL9A1P20849 921 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 HOXD13P35453 343 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 TAF6P49848 677 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 MTMR3Q13615 1198 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 OVOS1Q6IE37 1185 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 TRIM67Q6ZTA4 783 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 HS2ST1Q7LGA3 356 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 GRASPQ7Z6J2 395 aaPredicted RBP17.55■□□□□ 0.4
COL1A1-202ENST00000463440 NELFCDQ8IXH7 590 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 FSIP1Q8NA03 581 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 SCFD1Q8WVM8 642 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 ZNF560Q96MR9 790 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 HSPBP1Q9NZL4 362 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 DSEQ9UL01 958 aa17.55■□□□□ 0.4
COL1A1-202ENST00000463440 SPTLC1O15269 473 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 LRG1P02750 347 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 ASGR2P07307 311 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 FSHRP23945 695 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 PNPLA4P41247 253 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 NDUFA8P51970 172 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 WNT7BP56706 349 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 SIGLEC14Q08ET2 396 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 PSMD2Q13200 908 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 SURF1Q15526 300 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 SV2CQ496J9 727 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 GET4Q7L5D6 327 aaPredicted RBP17.54■□□□□ 0.4
COL1A1-202ENST00000463440 TCEAL8Q8IYN2 117 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 UBALD2Q8IYN6 164 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 CYP4F11Q9HBI6 524 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 PDE11AQ9HCR9 933 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 CGNQ9P2M7 1197 aaKnown RBP17.54■□□□□ 0.4
COL1A1-202ENST00000463440 AFF4Q9UHB7 1163 aaKnown RBP17.54■□□□□ 0.4
COL1A1-202ENST00000463440 MYO10Q9HD67 2058 aa17.54■□□□□ 0.4
COL1A1-202ENST00000463440 TMEM221A6NGB7 291 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 M0R296 226 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 TGFB1I1O43294 461 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 KLRC4O43908 158 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 N4BP1O75113 896 aaKnown RBP17.53■□□□□ 0.4
COL1A1-202ENST00000463440 TMEM191BP0C7N4 346 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 ADCY1Q08828 1119 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 BMT2Q1RMZ1 405 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 METTL23Q86XA0 190 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 CCDC47Q96A33 483 aaKnown RBP17.53■□□□□ 0.4
COL1A1-202ENST00000463440 MYADMQ96S97 322 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 GDPD2Q9HCC8 539 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 IGSF9Q9P2J2 1179 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 EPS15L1Q9UBC2 864 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 ITGA11Q9UKX5 1188 aa17.53■□□□□ 0.4
COL1A1-202ENST00000463440 ZFP37Q9Y6Q3 630 aaPredicted RBP17.53■□□□□ 0.4
COL1A1-202ENST00000463440 SCN1AP35498 2009 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 CYB561D2O14569 222 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 CLIC2O15247 247 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 SEC24AO95486 1093 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 ITGB3P05106 788 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 CYP11A1P05108 521 aa17.52■□□□□ 0.4
COL1A1-202ENST00000463440 POLR2BP30876 1174 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms