RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 ZNF560Q96MR9 790 aa21.83■■□□□ 1.09
NUP43-205ENST00000463048 NGRNQ9NPE2 291 aaKnown RBP21.83■■□□□ 1.09
NUP43-205ENST00000463048 MYO7AQ13402 2215 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 PRRC2BQ5JSZ5 2229 aaKnown RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 C2orf71A6NGG8 1288 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 LETM1O95202 739 aaPredicted RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 FGFR1OPO95684 399 aaKnown RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 C4BPAP04003 597 aaKnown RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 MYL6P60660 151 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 SKIV2LQ15477 1246 aaKnown RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 SV2CQ496J9 727 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 KIAA0319Q5VV43 1072 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 EP400NLQ6ZTU2 488 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 SV2AQ7L0J3 742 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 MRPL43Q8N983 215 aaKnown RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 CNOT6LQ96LI5 555 aaKnown RBP21.82■■□□□ 1.08
NUP43-205ENST00000463048 TLE6Q9H808 572 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 CHST7Q9NS84 486 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 LMCD1Q9NZU5 365 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 VWA8A3KMH1 1905 aa21.82■■□□□ 1.08
NUP43-205ENST00000463048 KPNA7A9QM74 516 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 CYB561D2O14569 222 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 VNN1O95497 513 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 CCDC192P0DO97 292 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 FGFR3P22607 806 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 PIK3CAP42336 1068 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 AP3M2P53677 418 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 CLDN10P78369 228 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 DSG1Q02413 1049 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 PSMD5Q16401 504 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 LLGL2Q6P1M3 1020 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 FOXR2Q6PJQ5 311 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 FRMD5Q7Z6J6 570 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 METTL14Q9HCE5 456 aaKnown RBP21.81■■□□□ 1.08
NUP43-205ENST00000463048 PCDHB8Q9UN66 801 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 SNX9Q9Y5X1 595 aa21.81■■□□□ 1.08
NUP43-205ENST00000463048 IKBKBO14920 756 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 HLA-DRAP01903 254 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 POU3F3P20264 500 aaPredicted RBP21.8■■□□□ 1.08
NUP43-205ENST00000463048 PNPLA4P41247 253 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 RBM10P98175 930 aaKnown RBP21.8■■□□□ 1.08
NUP43-205ENST00000463048 HYAL1Q12794 435 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 MYO1EQ12965 1108 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 NCOA4Q13772 614 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 VARS2Q5ST30 1063 aaKnown RBP21.8■■□□□ 1.08
NUP43-205ENST00000463048 PDE12Q6L8Q7 609 aaKnown RBP21.8■■□□□ 1.08
NUP43-205ENST00000463048 LRRC52Q8N7C0 313 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 MAFAQ8NHW3 353 aaPredicted RBP21.8■■□□□ 1.08
NUP43-205ENST00000463048 PI4K2AQ9BTU6 479 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 SAMSN1Q9NSI8 373 aaKnown RBP21.8■■□□□ 1.08
NUP43-205ENST00000463048 STK39Q9UEW8 545 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 NFE2L3Q9Y4A8 694 aa21.8■■□□□ 1.08
NUP43-205ENST00000463048 GNA14O95837 355 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 CNPP09543 421 aaKnown RBP21.79■■□□□ 1.08
NUP43-205ENST00000463048 ODC1P11926 461 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 KLRC2P26717 231 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 MTIF2P46199 727 aaKnown RBP21.79■■□□□ 1.08
NUP43-205ENST00000463048 AARSP49588 968 aaKnown RBP eCLIP21.79■■□□□ 1.08
NUP43-205ENST00000463048 MXI1P50539 228 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 CDR1P51861 262 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 ARPP19P56211 112 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 ZACNQ401N2 412 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 CBWD6Q4V339 395 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 CBWD3Q5JTY5 395 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 CBWD5Q5RIA9 395 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 IRF2BP1Q8IU81 584 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 AOPEPQ8N6M6 819 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 LNX1Q8TBB1 728 aaPredicted RBP21.79■■□□□ 1.08
NUP43-205ENST00000463048 TAS1R2Q8TE23 839 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 SLC35C1Q96A29 364 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 KLHL5Q96PQ7 755 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 MMS19Q96T76 1030 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 TMEM8AQ9HCN3 771 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 NXF1Q9UBU9 619 aaKnown RBP21.79■■□□□ 1.08
NUP43-205ENST00000463048 POLIQ9UNA4 740 aa21.79■■□□□ 1.08
NUP43-205ENST00000463048 M0QZQ0 153 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 SYN3O14994 580 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 TEX28O15482 410 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 LINC01565O15544 149 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 ADAM12O43184 909 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 STX10O60499 249 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 LILRB3O75022 631 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 LRRN2O75325 713 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 ZNF699Q32M78 642 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 CT47A1Q5JQC4 288 aaPredicted RBP21.78■■□□□ 1.08
NUP43-205ENST00000463048 WSCD1Q658N2 575 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 SPOPLQ6IQ16 392 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 SCARA5Q6ZMJ2 495 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 PALB2Q86YC2 1186 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 APPL2Q8NEU8 664 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 ENOX1Q8TC92 643 aaKnown RBP21.78■■□□□ 1.08
NUP43-205ENST00000463048 PIK3R5Q8WYR1 880 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 PPP2R3CQ969Q6 453 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 FUCA2Q9BTY2 467 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 EMILIN2Q9BXX0 1053 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 THAP9Q9H5L6 903 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 MAGEC2Q9UBF1 373 aaPredicted RBP21.78■■□□□ 1.08
NUP43-205ENST00000463048 SSX2IPQ9Y2D8 614 aa21.78■■□□□ 1.08
NUP43-205ENST00000463048 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms