RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 LACTBL1A8MY62 500 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 NFICP08651 508 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 GNAT1P11488 350 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 NKX3-2P78367 333 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CDC42EP1Q00587 391 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 SGSM1Q2NKQ1 1148 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 ZNF699Q32M78 642 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CCDC70Q6NSX1 233 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 UBR7Q8N806 425 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 RAET1EQ8TD07 263 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CALR3Q96L12 384 aaKnown RBP15.47■□□□□ 0.07
HDAC6-213ENST00000462730 NIF3L1Q9GZT8 377 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CDHR5Q9HBB8 845 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 RBM12Q9NTZ6 932 aaKnown RBP15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CHORDC1Q9UHD1 332 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-213ENST00000462730 TARSL2A2RTX5 802 aaKnown RBP15.47■□□□□ 0.07
HDAC6-213ENST00000462730 TMEM110-MUSTN1A8MSY1 372 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CEP104O60308 925 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 MYCNP04198 464 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CYP1A2P05177 515 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 TUBBP07437 444 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 GNA15P30679 374 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 RNASE9P60153 205 aaKnown RBP15.47■□□□□ 0.07
HDAC6-213ENST00000462730 MAP3K21Q5TCX8 1036 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 C11orf63Q6NUN7 778 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 HES6Q96HZ4 224 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 SELENOOQ9BVL4 669 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 GTF3C4Q9UKN8 822 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 CNTN6Q9UQ52 1028 aa15.47■□□□□ 0.07
HDAC6-213ENST00000462730 A0A1B0GUA9 196 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 MEFVO15553 781 aaPredicted RBP15.46■□□□□ 0.07
HDAC6-213ENST00000462730 ERLIN1O75477 346 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 MTA2O94776 668 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 KYAT1Q16773 422 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 NBPF20Q3BBV1 942 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 JADE1Q6IE81 842 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 WDR93Q6P2C0 686 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 SCARA5Q6ZMJ2 495 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 HDXQ7Z353 690 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 EXOC4Q96A65 974 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 NUP85Q9BW27 656 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 GTF2IRD1Q9UHL9 959 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 ADAM21Q9UKJ8 722 aa15.46■□□□□ 0.07
HDAC6-213ENST00000462730 THAP12O43422 761 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 KRT19P08727 400 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 UNGP13051 313 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 DARSP14868 501 aaKnown RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 CD58P19256 250 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 ZNF132P52740 706 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 NAA35Q5VZE5 725 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 CATSPER4Q7RTX7 472 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 ZNF564Q8TBZ8 553 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 TMEM40Q8WWA1 233 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 ADPGKQ9BRR6 497 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 XYLT2Q9H1B5 865 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 PSD3Q9NYI0 1048 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 DNAH12Q6ZR08 3092 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 DDX3YO15523 660 aaKnown RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 GNRH1P01148 92 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 ASGR1P07306 291 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 CHRM1P11229 460 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 EIF4BP23588 611 aaKnown RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 GYS2P54840 703 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 TRIM72Q6ZMU5 477 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 PASD1Q8IV76 773 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 TMEM130Q8N3G9 435 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 USP38Q8NB14 1042 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 KLHDC9Q8NEP7 349 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 ZNF296Q8WUU4 475 aaPredicted RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 CPA5Q8WXQ8 436 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 LRRC1Q9BTT6 524 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 CNOT8Q9UFF9 292 aaKnown RBP15.45■□□□□ 0.06
HDAC6-213ENST00000462730 SIX4Q9UIU6 781 aa15.45■□□□□ 0.06
HDAC6-213ENST00000462730 PGRMC1O00264 195 aaKnown RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CYP1A1P04798 512 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CFHP08603 1231 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 MCM3P25205 808 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 HOXA11P31270 313 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 SSTR3P32745 418 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 POU5F1Q01860 360 aaKnown RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 MESDQ14696 234 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 SNX17Q15036 470 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 KCNA10Q16322 511 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 SLC10A6Q3KNW5 377 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 FAM47CQ5HY64 1035 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 GDF6Q6KF10 455 aaPredicted RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 TAF2Q6P1X5 1199 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 MCOLN2Q8IZK6 566 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 C1orf127Q8N9H9 656 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 ACTRT1Q8TDG2 376 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 PXYLP1Q8TE99 480 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CYFIP2Q96F07 1278 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 ASB7Q9H672 318 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 CISHQ9NSE2 258 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 UVRAGQ9P2Y5 699 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 DDX20Q9UHI6 824 aaKnown RBP15.44■□□□□ 0.06
HDAC6-213ENST00000462730 L1RE1Q9UN81 338 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 POLIQ9UNA4 740 aa15.44■□□□□ 0.06
HDAC6-213ENST00000462730 NOC2LQ9Y3T9 749 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms