RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 IRF2BPLQ9H1B7 796 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 SLC39A2Q9NP94 309 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 IL17RBQ9NRM6 502 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 PI4KBQ9UBF8 816 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 ZKSCAN5Q9Y2L8 839 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 WDR33Q9C0J8 1336 aaKnown RBP8.42□□□□□ -1.06
UBE4B-204ENST00000462658 PSME4Q14997 1843 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 NAV1Q8NEY1 1877 aa8.42□□□□□ -1.06
UBE4B-204ENST00000462658 LAMB1P07942 1786 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 CCDC196A0A1B0GTZ2 297 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 H7C1D1 291 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 CDKL5O76039 1030 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 MMEP08473 750 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 CALM1P0DP23 149 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 CALM2P0DP24 149 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 CALM3P0DP25 149 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 SHMT1P34896 483 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 HTRA3P83110 453 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 DSG1Q02413 1049 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 DBPQ10586 325 aaPredicted RBP8.41□□□□□ -1.06
UBE4B-204ENST00000462658 ADAM9Q13443 819 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 PPP2R5BQ15173 497 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 VMACQ2NL98 169 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 VASNQ6EMK4 673 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 CILP2Q8IUL8 1156 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 GPC2Q8N158 579 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 FANCBQ8NB91 859 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 NUP133Q8WUM0 1156 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 CHTF18Q8WVB6 975 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 KAT14Q9H8E8 782 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 VEZTQ9HBM0 779 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 KCNH7Q9NS40 1196 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 THG1LQ9NWX6 298 aaKnown RBP8.41□□□□□ -1.06
UBE4B-204ENST00000462658 HSPBP1Q9NZL4 362 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 KIF3AQ9Y496 699 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 PCNTO95613 3336 aa8.41□□□□□ -1.06
UBE4B-204ENST00000462658 DDX60LQ5H9U9 1706 aaKnown RBP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 NID2Q14112 1375 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 ATRNL1Q5VV63 1379 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 GLTPD2A6NH11 291 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 RASSF10A6NK89 507 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 RFXAPO00287 272 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 NUAK1O60285 661 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 GAS7O60861 476 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 ZSCAN22P10073 491 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 FDPSP14324 419 aaKnown RBP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 AKR1B1P15121 316 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 MC4RP32245 332 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 SCNN1BP51168 640 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 KIF11P52732 1056 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 PFKPQ01813 784 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 TROAPQ12815 778 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 RTP5Q14D33 572 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 TBC1D10BQ4KMP7 808 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 FILIP1Q7Z7B0 1213 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 STRA8Q7Z7C7 330 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 FAM83AQ86UY5 434 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 KIF18BQ86Y91 864 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 ADGRG2Q8IZP9 1017 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 CHAC2Q8WUX2 184 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 DACT3Q96B18 629 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 CCDC17Q96LX7 622 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 GBP4Q96PP9 640 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 KRTAP4-8Q9BYQ9 185 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 CAAP1Q9H8G2 361 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 SPATA6Q9NWH7 488 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 OXSMQ9NWU1 459 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 ORC3Q9UBD5 711 aaPredicted RBP8.4□□□□□ -1.06
UBE4B-204ENST00000462658 STX8Q9UNK0 236 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 MTMR6Q9Y217 621 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 PRKAB1Q9Y478 270 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 MYH1P12882 1939 aa8.4□□□□□ -1.06
UBE4B-204ENST00000462658 CDK5RAP2Q96SN8 1893 aa8.4□□□□□ -1.07
UBE4B-204ENST00000462658 COL2A1P02458 1487 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 CNTNAP1P78357 1384 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 SCN4AP35499 1836 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 FOCADQ5VW36 1801 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 VPS37CA5D8V6 355 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 H3BQV1 296 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 MPHOSPH10O00566 681 aaKnown RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 DDNO94850 711 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 IFNAR1P17181 557 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 SLC9A1P19634 815 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 CERKLQ49MI3 558 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 CATSPEREQ5SY80 951 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 TATDN1Q6P1N9 297 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 CLEC17AQ6ZS10 378 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 LINC00482Q8N8I6 264 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 KYQ8NBH2 561 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 OR2W6PQ8NHA6 318 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 CTCFLQ8NI51 663 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 PHKBQ93100 1093 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 CEP95Q96GE4 821 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 MAP3K14Q99558 947 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 TMEM47Q9BQJ4 181 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 FAM126AQ9BYI3 521 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-204ENST00000462658 TMEM39BQ9GZU3 492 aa8.39□□□□□ -1.07
UBE4B-204ENST00000462658 DNAJC18Q9H819 358 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms