RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 SLC8B1Q6J4K2 584 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ALKAL1Q6UXT8 129 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 TPRG1Q6ZUI0 275 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 PHLPP2Q6ZVD8 1323 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 RTL10Q7L3V2 364 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 SYT2Q8N9I0 419 aaPredicted RBP8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 LINC00301Q8NCQ3 95 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 DEPTORQ8TB45 409 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 KIFAP3Q92845 792 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 TCEAL4Q96EI5 215 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 EPSTI1Q96J88 318 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 UROC1Q96N76 676 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZMAT2Q96NC0 199 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 BCO2Q9BYV7 579 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 CCSER1Q9C0I3 900 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 CDT1Q9H211 546 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 EPC1Q9H2F5 836 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 PTPRHQ9HD43 1115 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 HEBP1Q9NRV9 189 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZDHHC9Q9Y397 364 aa8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 MRPS23Q9Y3D9 190 aaKnown RBP8.67□□□□□ -1.02
CDC42BPA-210ENST00000462553 NPHP3-ACAD11A0A0J9YXS1 232 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 PODXLO00592 558 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 LAMTOR5O43504 91 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 MOSPD3O75425 235 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 SEC24AO95486 1093 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 PROZP22891 400 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 GRM5P41594 1212 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 MAGEA9P43362 315 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 RPS9P46781 194 aaKnown RBP8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 NPTX2P47972 431 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 EFNA5P52803 228 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 MRPL58Q14197 206 aaKnown RBP8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 MCM6Q14566 821 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 PUM1Q14671 1186 aaKnown RBP eCLIP8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 PPP2R5AQ15172 486 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 TMEM132AQ24JP5 1023 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 RSPO4Q2I0M5 234 aaPredicted RBP8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 TSSK4Q6SA08 328 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 ANKS3Q6ZW76 656 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 TMEM130Q8N3G9 435 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 KCTD17Q8N5Z5 321 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZNF461Q8TAF7 563 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 RAD54LQ92698 747 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 ELSPBP1Q96BH3 223 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 MCRS1Q96EZ8 462 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 ACO2Q99798 780 aaKnown RBP8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 HINFPQ9BQA5 517 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 GDE1Q9NZC3 331 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 ARHGAP28Q9P2N2 729 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 SMG5Q9UPR3 1016 aaKnown RBP8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 TNFSF13BQ9Y275 285 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 PCDHGA2Q9Y5H1 932 aa8.66□□□□□ -1.02
CDC42BPA-210ENST00000462553 SPEGQ15772 3267 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 VNN2O95498 520 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 YEATS4O95619 227 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 HSP90AA1P07900 732 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 ATF2P15336 505 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 TGM1P22735 817 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 UBA7P41226 1012 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 PEX3P56589 373 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 CSTF1Q05048 431 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 RAD51AP2Q09MP3 1159 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 MTAPQ13126 283 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 GRM2Q14416 872 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 STK38Q15208 465 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 FAM78AQ5JUQ0 283 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZBTB41Q5SVQ8 909 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 TCEAL8Q8IYN2 117 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 KRI1Q8N9T8 703 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 LARP4BQ92615 738 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 DNASE1L2Q92874 299 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 C18orf25Q96B23 403 aaPredicted RBP8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 CALML4Q96GE6 196 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 CDK5RAP3Q96JB5 506 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 CHAMP1Q96JM3 812 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 IFT74Q96LB3 600 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 ASB16Q96NS5 453 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 FIZ1Q96SL8 496 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 REEP2Q9BRK0 252 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 TIPINQ9BVW5 301 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 ZSCAN32Q9NX65 697 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 CNTN3Q9P232 1028 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 TFIP11Q9UBB9 837 aaKnown RBP8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 INSL5Q9Y5Q6 135 aa8.65□□□□□ -1.02
CDC42BPA-210ENST00000462553 ANAPC1Q9H1A4 1944 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 SFI1A8K8P3 1242 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 ARNTLO00327 626 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 SYN3O14994 580 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 SPTLC2O15270 562 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 TRAPPC3O43617 180 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 PPP6R2O75170 966 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 MICAL2O94851 1124 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 LRG1P02750 347 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 PDIA4P13667 645 aaKnown RBP8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 KCNE1P15382 129 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 PTPN2P17706 415 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 ZNF131P52739 623 aa8.64□□□□□ -1.03
CDC42BPA-210ENST00000462553 EPHA5P54756 1037 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms